RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 CASP8Q14790 479 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 TMEM270Q6UE05 265 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 PRRT2Q7Z6L0 340 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 IWS1Q96ST2 819 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 AGPAT1Q99943 283 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 FAM117AQ9C073 453 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 RNPEPQ9H4A4 650 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 TAF1DQ9H5J8 278 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 AKT3Q9Y243 479 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 N6AMT1Q9Y5N5 214 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 HTTP42858 3142 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 CELF2O95319 508 aaKnown RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 VTNP04004 478 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 MYCLP1P12525 358 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 MUTP22033 750 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 OSBPP22059 807 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 IL4RP24394 825 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 CYP24A1Q07973 514 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 CAPSQ13938 189 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 C4orf46Q504U0 113 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 BEND6Q5SZJ8 279 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 OR5B17Q8NGF7 314 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 SYN2Q92777 582 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 HAPLN2Q9GZV7 340 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 FAM49AQ9H0Q0 323 aaPredicted RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 DPH5Q9H2P9 285 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 RRAGCQ9HB90 399 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 NFU1Q9UMS0 254 aa11.58□□□□□ -0.56
NEDD9-201ENST00000379433 BZW2Q9Y6E2 419 aaKnown RBP11.58□□□□□ -0.56
NEDD9-201ENST00000379433 ANO9A1A5B4 782 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 DKC1O60832 514 aaKnown RBP eCLIP11.57□□□□□ -0.56
NEDD9-201ENST00000379433 STBD1O95210 358 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 MARCKSL1P49006 195 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 NEDD9Q14511 834 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 TXLNBQ8N3L3 684 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 TPCN2Q8NHX9 752 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 LMO3Q8TAP4 145 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 PCDHB18PQ96TA0 734 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 FAM118BQ9BPY3 351 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 STRA6Q9BX79 667 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 CELF4Q9BZC1 486 aaKnown RBP11.57□□□□□ -0.56
NEDD9-201ENST00000379433 TRIM7Q9C029 511 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 C1orf112Q9NSG2 853 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 UBAP1Q9NZ09 502 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 BLOC1S6Q9UL45 172 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 USTQ9Y2C2 406 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 UMODL1Q5DID0 1318 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 ANKRD33BA6NCL7 494 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 H3BQF6 201 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 KRIT1O00522 736 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 HEXIM1O94992 359 aaKnown RBP11.57□□□□□ -0.56
NEDD9-201ENST00000379433 LYPLA2O95372 231 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 ADORA2AP29274 412 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 ATICP31939 592 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 HSP90B2PQ58FF3 399 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 WDR44Q5JSH3 913 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 NOL9Q5SY16 702 aaKnown RBP11.57□□□□□ -0.56
NEDD9-201ENST00000379433 TMEM110Q86TL2 294 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 DNERQ8NFT8 737 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 ZNF653Q96CK0 615 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 SPOPO43791 374 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 CNMDO75829 334 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 FGGP02679 453 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 GLI1P08151 1106 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 CFHP08603 1231 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
NEDD9-201ENST00000379433 SNAPC2Q13487 334 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 HHATQ5VTY9 493 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 EFCAB12Q6NXP0 572 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 AFG1LQ8WV93 481 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 MTMR12Q9C0I1 747 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 AMACRQ9UHK6 382 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 COG5Q9UP83 839 aa11.57□□□□□ -0.56
NEDD9-201ENST00000379433 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 LCA5LO95447 670 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 HLA-DRAP01903 254 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 WEE2P0C1S8 567 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 CARSP49589 748 aaKnown RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 PDE6CP51160 858 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 MFAP3P55082 362 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 SH3D19Q5HYK7 790 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 FAM182AQ5T1J6 154 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 HDXQ7Z353 690 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 CPB2Q96IY4 423 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 NACA2Q9H009 215 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 SUCLA2Q9P2R7 463 aaPredicted RBP11.56□□□□□ -0.56
NEDD9-201ENST00000379433 NR2E1Q9Y466 385 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 PHIPQ8WWQ0 1821 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 BRD3Q15059 726 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 XRRA1Q6P2D8 792 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 METTL7BQ6UX53 244 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 ARMCX2Q7L311 632 aa11.56□□□□□ -0.56
NEDD9-201ENST00000379433 MYO1HQ8N1T3 1032 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms