RNA–Protein interactions for RNA: ENST00000379390.10

TM6SF1-204, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM6SF1, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-204ENST00000379390 SMIM28A0A1B0GU29 152 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 POMCP01189 267 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 PAN2Q504Q3 1202 aaKnown RBP26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 XKR4Q5GH76 650 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 TRIM59Q8IWR1 403 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 TMEM130Q8N3G9 435 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 TMC2Q8TDI7 906 aa26.5■■□□□ 1.83
TM6SF1-204ENST00000379390 HOXA2O43364 376 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 DGKIO75912 1065 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 ATP2A2P16615 1042 aaKnown RBP26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 TNNI1P19237 187 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 TMEM132DQ14C87 1099 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 NOMO2Q5JPE7 1267 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 C1orf220Q5T0J3 134 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 CD302Q8IX05 232 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 CASD1Q96PB1 797 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 SLC9A7Q96T83 725 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 CGRRF1Q99675 332 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 MMRN2Q9H8L6 949 aa26.49■■□□□ 1.83
TM6SF1-204ENST00000379390 SCN1AP35498 2009 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 TBKBP1A7MCY6 615 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 KCNE1P15382 129 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 CDK11BP21127 795 aaKnown RBP26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 EEF1GP26641 437 aaKnown RBP26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 TPM4P67936 248 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 TFAMQ00059 246 aaKnown RBP26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 SURF1Q15526 300 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 URGCPQ8TCY9 931 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 SLC35C1Q96A29 364 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 TMEM117Q9H0C3 514 aa26.48■■□□□ 1.83
TM6SF1-204ENST00000379390 NLRC5Q86WI3 1866 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 LAMA3Q16787 3333 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 INPPL1O15357 1258 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 KRT31Q15323 416 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 HERC6Q8IVU3 1022 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 OR5B17Q8NGF7 314 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 C18orf25Q96B23 403 aaPredicted RBP26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 PPP1R10Q96QC0 940 aaKnown RBP26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 MTMR12Q9C0I1 747 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 TAB2Q9NYJ8 693 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 HCSTQ9UBK5 93 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 TUBGCP4Q9UGJ1 667 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 GJB5O95377 273 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 THP07101 528 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 GUCY2FP51841 1108 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 USP37Q86T82 979 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 WDR49Q8IV35 697 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 ZNF516Q92618 1163 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 YME1L1Q96TA2 773 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 TUBGCP2Q9BSJ2 902 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 ZBED2Q9BTP6 218 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 TBC1D13Q9NVG8 400 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 C2CD2Q9Y426 696 aa26.47■■□□□ 1.83
TM6SF1-204ENST00000379390 PRKCSHP14314 528 aaPredicted RBP26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 PPP3CAQ08209 521 aa26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 GRIK3Q13003 919 aa26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 FAM109BQ6ICB4 259 aaPredicted RBP26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 RC3H2Q9HBD1 1191 aaKnown RBP26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 GOLGA2P5Q9HBQ8 144 aa26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 INTS13Q9NVM9 706 aa26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 CACNG4Q9UBN1 327 aa26.46■■□□□ 1.83
TM6SF1-204ENST00000379390 TMEM191BP0C7N4 346 aa26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 GCLMP48507 274 aa26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 CLDN10P78369 228 aa26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 RNASELQ05823 741 aaKnown RBP26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 SOX4Q06945 474 aaPredicted RBP26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 PHOSPHO2Q8TCD6 241 aa26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 ZNF689Q96CS4 500 aaPredicted RBP26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 DERAQ9Y315 318 aa26.45■■□□□ 1.82
TM6SF1-204ENST00000379390 B4GALT3O60512 393 aa26.44■■□□□ 1.82
TM6SF1-204ENST00000379390 NAB2Q15742 525 aa26.44■■□□□ 1.82
TM6SF1-204ENST00000379390 ZBTB6Q15916 424 aa26.44■■□□□ 1.82
TM6SF1-204ENST00000379390 MAN2A1Q16706 1144 aa26.44■■□□□ 1.82
TM6SF1-204ENST00000379390 PES1O00541 588 aaKnown RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 MCCD1P59942 119 aaPredicted RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 ENPEPQ07075 957 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 KCNH2Q12809 1159 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 MIIPQ5JXC2 388 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 CHRDL2Q6WN34 429 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 ZNF280BQ86YH2 543 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 ANKRD20A12PQ8NF67 263 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 ANKRD36BP1Q96IX9 119 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 VPS16Q9H269 839 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 LIMA1Q9UHB6 759 aaKnown RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 UBQLN1Q9UMX0 589 aaKnown RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 GRXCR1A8MXD5 290 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 DDHD2O94830 711 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 TNNC2P02585 160 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 BMP8BP34820 402 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 RABGGTBP53611 331 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 DUOXA2Q1HG44 320 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 CBWD6Q4V339 395 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 CBWD3Q5JTY5 395 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 CBWD5Q5RIA9 395 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 TDRD10Q5VZ19 366 aaKnown RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 SCARA3Q6AZY7 606 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 APTXQ7Z2E3 356 aaKnown RBP26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 NT5DC4Q86YG4 428 aa26.43■■□□□ 1.82
TM6SF1-204ENST00000379390 LRRC43Q8N309 656 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms