RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 COLEC11Q9BWP8 271 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 RBAKQ9NYW8 714 aaPredicted RBP20.36■□□□□ 0.85
SSU72-203ENST00000378725 LZTS1Q9Y250 596 aa20.36■□□□□ 0.85
SSU72-203ENST00000378725 RALGAPA2Q2PPJ7 1873 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 GRM6O15303 877 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 CYP3A5P20815 502 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 WNT7BP56706 349 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 KRT17Q04695 432 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 UBE3AQ05086 875 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 STIM1Q13586 685 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 ADGRE1Q14246 886 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 EDRF1Q3B7T1 1238 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 JADE1Q6IE81 842 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 TMEM173Q86WV6 379 aaPredicted RBP20.35■□□□□ 0.85
SSU72-203ENST00000378725 NT5DC4Q86YG4 428 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 GDPD5Q8WTR4 605 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 BCL7CQ8WUZ0 217 aaPredicted RBP20.35■□□□□ 0.85
SSU72-203ENST00000378725 C18orf25Q96B23 403 aaPredicted RBP20.35■□□□□ 0.85
SSU72-203ENST00000378725 FAM212AQ96EL1 285 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 KIF12Q96FN5 646 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 UROC1Q96N76 676 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 LMAN2LQ9H0V9 348 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 ALG13Q9NP73 1137 aaKnown RBP20.35■□□□□ 0.85
SSU72-203ENST00000378725 MARCH5Q9NX47 278 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 LMCD1Q9NZU5 365 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 C2CD2Q9Y426 696 aa20.35■□□□□ 0.85
SSU72-203ENST00000378725 CASTOR2A6NHX0 329 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 EXOC3O60645 756 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 EFEMP2O95967 443 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 PTMSP20962 102 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 CCNE1P24864 410 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 RPL9P32969 192 aaKnown RBP20.34■□□□□ 0.85
SSU72-203ENST00000378725 SPAG1Q07617 926 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 CAMK1Q14012 370 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 SNRNP35Q16560 246 aaKnown RBP20.34■□□□□ 0.85
SSU72-203ENST00000378725 UPP1Q16831 310 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 ANKRD40Q6AI12 368 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 RDH13Q8NBN7 331 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 DDX27Q96GQ7 796 aaKnown RBP20.34■□□□□ 0.85
SSU72-203ENST00000378725 MFSD14AQ96MC6 490 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 PAAF1Q9BRP4 392 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 CACNG4Q9UBN1 327 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 UBQLN1Q9UMX0 589 aaKnown RBP20.34■□□□□ 0.85
SSU72-203ENST00000378725 CHD9Q3L8U1 2897 aa20.34■□□□□ 0.85
SSU72-203ENST00000378725 KIAA1671Q9BY89 1806 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 PSMA7O14818 248 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 XPOTO43592 962 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 NFICP08651 508 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 DNAJB1P25685 340 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 RPL13P26373 211 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 LRPAP1P30533 357 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 CLCNKBP51801 687 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 PMS1P54277 932 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 ADAM9Q13443 819 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 SURF1Q15526 300 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 SPATA1Q5VX52 437 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 DCLRE1AQ6PJP8 1040 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 FOXR2Q6PJQ5 311 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 DDX53Q86TM3 631 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 NOC3LQ8WTT2 800 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 POF1BQ8WVV4 589 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 TMEM169Q96HH4 297 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 GOLGA2P5Q9HBQ8 144 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 PDE11AQ9HCR9 933 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 STK39Q9UEW8 545 aa20.33■□□□□ 0.85
SSU72-203ENST00000378725 PUF60Q9UHX1 559 aaKnown RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 PRG3Q9Y2Y8 225 aaPredicted RBP20.33■□□□□ 0.85
SSU72-203ENST00000378725 TMEM189-UBE2V1I3L0A0 370 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 MAPK13O15264 365 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 NR2F2P24468 414 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 LRRC63Q05C16 580 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 CYP24A1Q07973 514 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 TMEM132DQ14C87 1099 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 PSMD6Q15008 389 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 CD300LGQ6UXG3 332 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 ZC3H3Q8IXZ2 948 aaKnown RBP20.32■□□□□ 0.84
SSU72-203ENST00000378725 EFCAB13Q8IY85 973 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 MLKLQ8NB16 471 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 MYLIPQ8WY64 445 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 RABGGTAQ92696 567 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 GAS2L1Q99501 681 aaPredicted RBP20.32■□□□□ 0.84
SSU72-203ENST00000378725 TUBGCP4Q9UGJ1 667 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 NLRC5Q86WI3 1866 aa20.32■□□□□ 0.84
SSU72-203ENST00000378725 F8W810 466 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 CASP4P49662 377 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 MCCD1P59942 119 aaPredicted RBP20.31■□□□□ 0.84
SSU72-203ENST00000378725 PTPROQ16827 1216 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 RNF168Q8IYW5 571 aaPredicted RBP20.31■□□□□ 0.84
SSU72-203ENST00000378725 BEST2Q8NFU1 509 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 MRPL38Q96DV4 380 aaKnown RBP20.31■□□□□ 0.84
SSU72-203ENST00000378725 TSG101Q99816 390 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 VN1R3Q9BXE9 311 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 TMEM63CQ9P1W3 806 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 ADAM28Q9UKQ2 775 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 FRMD4BQ9Y2L6 1034 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 MTCH2Q9Y6C9 303 aa20.31■□□□□ 0.84
SSU72-203ENST00000378725 TDRD15B5MCY1 1934 aaKnown RBP20.3■□□□□ 0.84
SSU72-203ENST00000378725 PODXLO00592 558 aa20.3■□□□□ 0.84
SSU72-203ENST00000378725 FSCN2O14926 492 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms