RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 DUSP10Q9Y6W6 482 aa11.94□□□□□ -0.5
RPGR-203ENST00000378505 IGSF9BQ9UPX0 1349 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CREB3O43889 395 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CDR2Q01850 454 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 PRKCEQ02156 737 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ARHGEF6Q15052 776 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ZNF677Q86XU0 584 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 RYBPQ8N488 228 aaPredicted RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 OR2W6PQ8NHA6 318 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ACAP3Q96P50 834 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ROPN1BQ9BZX4 212 aaPredicted RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 ROPN1Q9HAT0 212 aaPredicted RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 FNDC3AQ9Y2H6 1198 aaKnown RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 AK9Q5TCS8 1911 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 KIF20BQ96Q89 1820 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 MROH1Q8NDA8 1641 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 H3BRJ5 948 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CHEK2O96017 543 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 MYL3P08590 195 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 HSPA8P11142 646 aaKnown RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 MUTP22033 750 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 PON1P27169 355 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 SREBF1P36956 1147 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 EPHB1P54762 984 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 ESRRGP62508 458 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 SGSM3Q96HU1 749 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 AGBL1Q96MI9 1066 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 PPCSQ9HAB8 311 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CNOT7Q9UIV1 285 aaKnown RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 SPATA31A6Q5VVP1 1343 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CHN1P15882 459 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 PDGFRAP16234 1089 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 XPAP23025 273 aaPredicted RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 RFC5P40937 340 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 SATB1Q01826 763 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 P3H1Q32P28 736 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 C1orf228Q6PIY5 440 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 MICALL2Q8IY33 904 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 IL17RAQ96F46 866 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 TNIP3Q96KP6 325 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 RUSC1Q9BVN2 902 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 CELF4Q9BZC1 486 aaKnown RBP11.93□□□□□ -0.5
RPGR-203ENST00000378505 SLC13A1Q9BZW2 595 aa11.93□□□□□ -0.5
RPGR-203ENST00000378505 NOP14P78316 857 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 RBP5P82980 135 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 NFIAQ12857 509 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ITPRIPL1Q6GPH6 555 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 GJB7Q6PEY0 223 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 FASTKD5Q7L8L6 764 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 ECT2Q9H8V3 914 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 CACYBPQ9HB71 228 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 SPATS2LQ9NUQ6 558 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 AGAP1Q9UPQ3 857 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 KCNJ1P48048 391 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ACAD11Q709F0 780 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 RPAINQ86UA6 219 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 PARP9Q8IXQ6 854 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 CNPY4Q8N129 248 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 FSD1LQ9BXM9 530 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 DRC3Q9H069 523 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 KLC4Q9NSK0 619 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 APOL1O14791 398 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 TYK2P29597 1187 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ACTR2P61160 394 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 TSPY1Q01534 308 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 KRT80Q6KB66 452 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 LRRC31Q6UY01 552 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ALKBH8Q96BT7 664 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 ZDHHC15Q96MV8 337 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 SMARCAD1Q9H4L7 1026 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 KLHL11Q9NVR0 708 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 NEU2Q9Y3R4 380 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 RSPH10B2B2RC85 870 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 CCDC22O60826 627 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 RSPH10BP0C881 870 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ADORA2BP29275 332 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 CASP2P42575 452 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ACTN3Q08043 901 aaPredicted RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 PRMT1Q99873 361 aaKnown RBP11.92□□□□□ -0.5
RPGR-203ENST00000378505 EHD2Q9NZN4 543 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 ARHGAP20Q9P2F6 1191 aa11.92□□□□□ -0.5
RPGR-203ENST00000378505 FOXN3O00409 490 aaPredicted RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 EXTL3O43909 919 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 KRT10P13645 584 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 GIT2Q14161 759 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 KYNUQ16719 465 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 LONRF1Q17RB8 773 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 EARS2Q5JPH6 523 aaKnown RBP11.91□□□□□ -0.5
RPGR-203ENST00000378505 ANKMY2Q8IV38 441 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 SCN4BQ8IWT1 228 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 MAGEB5Q9BZ81 275 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 FAM129AQ9BZQ8 928 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 TMEM39BQ9GZU3 492 aa11.91□□□□□ -0.5
RPGR-203ENST00000378505 EHD4Q9H223 541 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms