RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 EMSYQ7Z589 1322 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 EYA4O95677 639 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TRIM49P0CI25 452 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TRIM49CP0CI26 452 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ST13P5Q8NFI4 369 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 OR2W6PQ8NHA6 318 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 STK33Q9BYT3 514 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 CD248Q9HCU0 757 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TRPC5Q9UL62 973 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 KITP10721 976 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 KRT4P19013 534 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TRAF7Q6Q0C0 670 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ICA1LQ8NDH6 482 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 AENQ8WTP8 325 aaKnown RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ERGIC2Q96RQ1 377 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ZBTB18Q99592 522 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 DIAPH2O60879 1101 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ITIH2P19823 946 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 BCAR1P56945 870 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TTC39CQ8N584 583 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 PPP1R14BQ96C90 147 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 UVRAGQ9P2Y5 699 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 ZNF229Q9UJW7 825 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 FGFR4P22455 802 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 PPARGP37231 505 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 TNFAIP2Q03169 654 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 HP1BP3Q5SSJ5 553 aaPredicted RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 SH3RF1Q7Z6J0 888 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 AGGF1Q8N302 714 aaeCLIP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 CYFIP2Q96F07 1278 aa15.3■□□□□ 0.04
PRDM16-203ENST00000378391 XPO6Q96QU8 1125 aaKnown RBP15.3■□□□□ 0.04
PRDM16-203ENST00000378391 NPR1P16066 1061 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PKN1Q16512 942 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 CEP55Q53EZ4 464 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 ADGRF4Q8IZF3 695 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 TRPV6Q9H1D0 765 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 L3MBTL1Q9Y468 752 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 TCRBV5S4A2TA0A5A2 114 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PI4K2BG5E9Z4 385 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 RAD51CO43502 376 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 CHN1P15882 459 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 OSBPP22059 807 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 GALCP54803 685 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 TSTA3Q13630 321 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PRMT1Q99873 361 aaKnown RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 EIF2AK1Q9BQI3 630 aaKnown RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 POLR3CQ9BUI4 534 aaPredicted RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 TRABDQ9H4I3 376 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PARVAQ9NVD7 372 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 BFARQ9NZS9 450 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 DKK3Q9UBP4 350 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 ABCB11O95342 1321 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 RNF103-CHMP3A0A140T963 221 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 H0YC42 278 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PHF2O75151 1096 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 RPS6KA4O75676 772 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 FAM107AO95990 144 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 HIF1AQ16665 826 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 ING2Q9H160 280 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 C10orf88Q9H8K7 445 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PPCSQ9HAB8 311 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 SRP68Q9UHB9 627 aaKnown RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 FEM1BQ9UK73 627 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PITPNM2Q9BZ72 1349 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 APOA1P02647 267 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 SCP2P22307 547 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 NAB2Q15742 525 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 HEATR6Q6AI08 1181 aaKnown RBP15.29■□□□□ 0.04
PRDM16-203ENST00000378391 ZNF341Q9BYN7 854 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 FAM8A1Q9UBU6 413 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 PPME1Q9Y570 386 aa15.29■□□□□ 0.04
PRDM16-203ENST00000378391 UCHL3P15374 230 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 XPAP23025 273 aaPredicted RBP15.28■□□□□ 0.04
PRDM16-203ENST00000378391 AMPD2Q01433 879 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 ABI1Q8IZP0 508 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 FOXP3Q9BZS1 431 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 SLC40A1Q9NP59 571 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 PGM1P36871 562 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 PBX1P40424 430 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 ARSEP51690 589 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 ARHGDIAP52565 204 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 ROR1Q01973 937 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 EPHA7Q15375 998 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 EDRF1Q3B7T1 1238 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 TTI2Q6NXR4 508 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 ALKBH8Q96BT7 664 aaKnown RBP15.28■□□□□ 0.04
PRDM16-203ENST00000378391 SLC26A4O43511 780 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 PRLRP16471 622 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 CRKP46108 304 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 PSMC5P62195 406 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 EEPD1Q7L9B9 569 aa15.28■□□□□ 0.04
PRDM16-203ENST00000378391 CDKL3Q8IVW4 592 aaPredicted RBP15.28■□□□□ 0.04
PRDM16-203ENST00000378391 SLC26A7Q8TE54 656 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms