RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ADRB2P07550 413 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 CLCNKBP51801 687 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 ADAM9Q13443 819 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 TUSC3Q13454 348 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 GPM6BQ13491 265 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 NAB2Q15742 525 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 KYAT1Q16773 422 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 GOLGA5Q8TBA6 731 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 BCL7CQ8WUZ0 217 aaPredicted RBP12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
DEPDC4-202ENST00000378244 GRM6O15303 877 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 ITGB1P05556 798 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 DSC1Q08554 894 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 CCDC183Q5T5S1 534 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 NELFBQ8WX92 580 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 P2RX5Q93086 422 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 PLEKHA5Q9HAU0 1116 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 INPPL1O15357 1258 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 B3GAT3O94766 335 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 NFKBIBQ15653 356 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 ZCWPW2Q504Y3 356 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 XKR4Q5GH76 650 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 CENPPQ6IPU0 288 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 BRSK2Q8IWQ3 736 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 TRIML1Q8N9V2 468 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 MICAL1Q8TDZ2 1067 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 MYLIPQ8WY64 445 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 TMEM169Q96HH4 297 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 C11orf84Q9BUA3 381 aaPredicted RBP12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 RWDD3Q9Y3V2 267 aa12.72□□□□□ -0.37
DEPDC4-202ENST00000378244 AKAP3O75969 853 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 KCNE1P15382 129 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 TNNI1P19237 187 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 DNAJB1P25685 340 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 CA8P35219 290 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 SNRPFP62306 86 aaKnown RBP12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 TMEM132DQ14C87 1099 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 MICALL1Q8N3F8 863 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 B3GALT6Q96L58 329 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 CDX2Q99626 313 aaPredicted RBP12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 TSG101Q99816 390 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 CGNQ9P2M7 1197 aaKnown RBP12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 FRMD4BQ9Y2L6 1034 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 PCDHGC5Q9Y5F6 944 aa12.71□□□□□ -0.37
DEPDC4-202ENST00000378244 PTPRJQ12913 1337 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 H3BNC9 293 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 I3L4J1 428 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 KIAA0391O15091 583 aaKnown RBP12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 KIF4AO95239 1232 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 CCNE1P24864 410 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 RPL13P26373 211 aaKnown RBP12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 ADGRE1Q14246 886 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 KLHL40Q2TBA0 621 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 SCARA3Q6AZY7 606 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 SASS6Q6UVJ0 657 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 C12orf56Q8IXR9 622 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 C3orf58Q8NDZ4 430 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 POF1BQ8WVV4 589 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 DHTKD1Q96HY7 919 aaPredicted RBP12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 IGSF21Q96ID5 467 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 FBXL18Q96ME1 805 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 SAMD11Q96NU1 681 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 FNBP1Q96RU3 617 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 ASB7Q9H672 318 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 KIAA1586Q9HCI6 787 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 SLC38A7Q9NVC3 462 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 DMAC2Q9NW81 257 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 TRIP11Q15643 1979 aa12.71□□□□□ -0.38
DEPDC4-202ENST00000378244 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 TMEM265A0A087WTH1 108 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 LPXNO60711 386 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 TADA2AO75478 443 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 KRT17Q04695 432 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PAK1Q13153 545 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 HSP90AA2PQ14568 343 aaPredicted RBP12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 SPPL3Q8TCT6 385 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 AUTS2Q8WXX7 1259 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 RSPH1Q8WYR4 309 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 GUCD1Q96NT3 240 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PLVAPQ9BX97 442 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 GTPBP4Q9BZE4 634 aaKnown RBP12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 MTMR12Q9C0I1 747 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 MARCH5Q9NX47 278 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 MTMR10Q9NXD2 777 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 UBQLN1Q9UMX0 589 aaKnown RBP12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 CITO14578 2027 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 C5orf67F2Z3F1 127 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 C2CD2LO14523 706 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PPEF2O14830 753 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 CETN3O15182 167 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 IL18RAPO95256 599 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 RB1P06400 928 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 IRS1P35568 1242 aa12.7□□□□□ -0.38
DEPDC4-202ENST00000378244 PPM1AP35813 382 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms