RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PFDN4Q9NQP4 134 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 KLHL8Q9P2G9 620 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 SPDYE16A6NNV3 312 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 TXNDC9O14530 226 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 TNPO2O14787 897 aaKnown RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 EXTL3O43909 919 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 C6orf222P0C671 652 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 PRPSAP1Q14558 356 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 GPAT2Q6NUI2 795 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 ATL2Q8NHH9 583 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 PRPF31Q8WWY3 499 aaKnown RBP13.99□□□□□ -0.17
NPHP4-203ENST00000378169 ZIM3Q96PE6 472 aa13.99□□□□□ -0.17
NPHP4-203ENST00000378169 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 GSTA1P08263 222 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 GSTA2P09210 222 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 LCP1P13796 627 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 BRD2P25440 801 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SNAPC2Q13487 334 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SEPT6Q14141 434 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 TAF1CQ15572 869 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SV2AQ7L0J3 742 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 TEX2Q8IWB9 1127 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 EFCAB13Q8IY85 973 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SNF8Q96H20 258 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 PURBQ96QR8 312 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 OSBPL8Q9BZF1 889 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 AGO4Q9HCK5 861 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 F8VZ95 297 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 EPHB6O15197 1021 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 BAG2O95816 211 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 GNAT1P11488 350 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 GARSP41250 739 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 PLA2G4AP47712 749 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 AP3M2P53677 418 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 NLRP11P59045 1033 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 MUM1L1Q5H9M0 696 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 AFAP1L2Q8N4X5 818 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 CCDC68Q9H2F9 335 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 LRFN2Q9ULH4 789 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 ATRNO75882 1429 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 CCL15-CCL14A0A0B4J2E2 113 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 GMNCA6NCL1 334 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 RPS6KA2Q15349 733 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 CCL15Q16663 113 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SPOPLQ6IQ16 392 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 TBC1D1Q86TI0 1168 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 ANKMY2Q8IV38 441 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 SIK2Q9H0K1 926 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 TCHHQ07283 1943 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 P4HA2O15460 535 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 FGRP09769 529 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 PGM5Q15124 567 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 PCNX4Q63HM2 1172 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 FBXO16Q8IX29 292 aaPredicted RBP13.98□□□□□ -0.17
NPHP4-203ENST00000378169 MMGT1Q8N4V1 131 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 ERAP1Q9NZ08 941 aa13.98□□□□□ -0.17
NPHP4-203ENST00000378169 ZSCAN5CA6NGD5 496 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-203ENST00000378169 DGKZQ13574 1117 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 TMEM132DQ14C87 1099 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 ARL13BQ3SXY8 428 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 CYP4A22Q5TCH4 519 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 IER5Q5VY09 327 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 TRIM68Q6AZZ1 485 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 EPM2AIP1Q7L775 607 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-203ENST00000378169 SENP7Q9BQF6 1050 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 MMTAG2Q9BU76 263 aaKnown RBP13.97□□□□□ -0.17
NPHP4-203ENST00000378169 MTMR12Q9C0I1 747 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 FIS1Q9Y3D6 152 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 A0A0G2JND7 137 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 A0A1B0GUA9 196 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 VWA5AO00534 786 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 PHF2O75151 1096 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 SPAG7O75391 227 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 RFC5P40937 340 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 CNTN2Q02246 1040 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 C1orf131Q8NDD1 294 aaKnown RBP13.97□□□□□ -0.17
NPHP4-203ENST00000378169 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 TNFRSF25Q93038 417 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 L1RE1Q9UN81 338 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 TRAF3IP3Q9Y228 551 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 LTN1O94822 1766 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 KRT37O76014 449 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 SLC25A27O95847 323 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 GH1P01241 217 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 KYNUQ16719 465 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 GLRA4Q5JXX5 417 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 SLC47A2Q86VL8 602 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 C4orf19Q8IY42 314 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 DEPDC1BQ8WUY9 529 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 ATG4AQ8WYN0 398 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 MAML1Q92585 1016 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 MKL1Q969V6 931 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 NIF3L1Q9GZT8 377 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 CARD9Q9H257 536 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 C17orf75Q9HAS0 396 aa13.97□□□□□ -0.17
NPHP4-203ENST00000378169 GTF3C4Q9UKN8 822 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms