RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 C19orf67A6NJJ6 358 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 I3L4J1 428 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 PODXLO00592 558 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CUTAO60888 179 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 LILRB3O75022 631 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 GCNT3O95395 438 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 SCP2P22307 547 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ABCD1P33897 745 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 TNFSF9P41273 254 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CREMQ03060 361 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 SOX4Q06945 474 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 SPAG1Q07617 926 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 STAMQ92783 540 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ZMAT2Q96NC0 199 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 NECTIN4Q96NY8 510 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 C1QTNF1Q9BXJ1 281 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CHST7Q9NS84 486 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CNTN3Q9P232 1028 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 MUTYHQ9UIF7 546 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CFAP45Q9UL16 551 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 NUB1Q9Y5A7 615 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 C5orf42Q9H799 3197 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 DCXO43602 365 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 TRAPPC3O43617 180 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 CLTAP09496 248 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ALADP13716 330 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 GAP43P17677 238 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 MTHFRP42898 656 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 BRCC3P46736 316 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 GTF2BQ00403 316 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 PSMD5Q16401 504 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 UPP1Q16831 310 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 SLC10A6Q3KNW5 377 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ZBTB41Q5SVQ8 909 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 MAP4K3Q8IVH8 894 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 NOC3LQ8WTT2 800 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 DDX27Q96GQ7 796 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 FIZ1Q96SL8 496 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 HAPLN2Q9GZV7 340 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 RXFP1Q9HBX9 757 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 PANK4Q9NVE7 773 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 FAM13BQ9NYF5 915 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 TUBGCP4Q9UGJ1 667 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 DPP7Q9UHL4 492 aa12.62□□□□□ -0.39
SMARCE1-203ENST00000377808 TISP43B9A030 160 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 PI4K2BG5E9Z4 385 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 OGTO15294 1046 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 TGM5O43548 720 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 EFEMP2O95967 443 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 PIGRP01833 764 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 KCNE1P15382 129 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 IGFBP6P24592 240 aaPredicted RBP12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 TKTP29401 623 aaKnown RBP12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 MCM4P33991 863 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 KYAT1Q16773 422 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 ADALQ6DHV7 355 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 SHC4Q6S5L8 630 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 ZNF720Q7Z2F6 126 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 CCDC65Q8IXS2 484 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 SYCP3Q8IZU3 236 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 IQUBQ8NA54 791 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 POMGNT1Q8WZA1 660 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 DNAJC19Q96DA6 116 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 LRRC27Q9C0I9 530 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 PIDD1Q9HB75 910 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 FNIP2Q9P278 1114 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 SEL1LQ9UBV2 794 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 EXOC7Q9UPT5 735 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 NR2E1Q9Y466 385 aa12.61□□□□□ -0.39
SMARCE1-203ENST00000377808 TRIP11Q15643 1979 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 CITO14578 2027 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 CCDC195A0A1B0GUA6 201 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 LACTBL1A8MY62 500 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 LOC730098B7Z3J9 87 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 ANKRD63C9JTQ0 380 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 TMEM189-UBE2V1I3L0A0 370 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 POLR2DO15514 142 aaKnown RBP12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 MEFVO15553 781 aaPredicted RBP12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 ACOT2P49753 483 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 PLXNA3P51805 1871 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 ASIC1P78348 528 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 BECN1Q14457 450 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 LIN9Q5TKA1 542 aa12.6□□□□□ -0.39
SMARCE1-203ENST00000377808 ATL3Q6DD88 541 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms