RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 VTNP04004 478 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 ITKQ08881 620 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 KIZQ2M2Z5 673 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 SLC35G1Q2M3R5 365 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 MTMR12Q9C0I1 747 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 THAP2Q9H0W7 228 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 LCMT1Q9UIC8 334 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 ATP8B3O60423 1300 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 TISP43B9A030 160 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 SGPL1O95470 568 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 ACSL3O95573 720 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 RGS2P41220 211 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 HSD17B4P51659 736 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 ATP11AP98196 1134 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 CUL2Q13617 745 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 TRAPPC12Q8WVT3 735 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 NCAPGQ9BPX3 1015 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 HEY1Q9Y5J3 304 aa15.42■□□□□ 0.06
TCOF1-202ENST00000377797 PIK3R2O00459 728 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 GTF2H1P32780 548 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 CPT1AP50416 773 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 LAMTOR4Q0VGL1 99 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 CFAP157Q5JU67 520 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 FYB2Q5VWT5 728 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 VAV3Q9UKW4 847 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 INTUQ9ULD6 942 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 MYPNQ86TC9 1320 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 COMTP21964 271 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 IFNAR2P48551 515 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF280AP59817 542 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 THEM5Q8N1Q8 247 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 TTC13Q8NBP0 860 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 SYT17Q9BSW7 474 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 TAF1DQ9H5J8 278 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 RBM12Q9NTZ6 932 aaKnown RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 SNED1Q8TER0 1413 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 A0A087WZ62 844 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ADCY1Q08828 1119 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 MPZL3Q6UWV2 235 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 SCN4BQ8IWT1 228 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 TNIP3Q96KP6 325 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 FDXACB1Q9BRP7 624 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 TMEM117Q9H0C3 514 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ATRNL1Q5VV63 1379 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 RASGRF2O14827 1237 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ITGB3P05106 788 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 SLC1A1P43005 524 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ITGB3BPQ13352 177 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 HYIQ5T013 277 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ARHGEF18Q6ZSZ5 1173 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 PDIK1LQ8N165 341 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 CCDC110Q8TBZ0 833 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 ATP2A3Q93084 1043 aa15.41■□□□□ 0.06
TCOF1-202ENST00000377797 TTC7AQ9ULT0 858 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 NOVA2Q9UNW9 492 aaKnown RBP15.41■□□□□ 0.06
TCOF1-202ENST00000377797 COL18A1P39060 1754 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 PI4K2BG5E9Z4 385 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 RPS6KA5O75582 802 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 NPTXRO95502 500 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF286BP0CG31 522 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 ARSHQ5FYA8 562 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 C6orf163Q5TEZ5 329 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 GPAT2Q6NUI2 795 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 SENP7Q9BQF6 1050 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 NUP98P52948 1817 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 TARSL2A2RTX5 802 aaKnown RBP15.4■□□□□ 0.06
TCOF1-202ENST00000377797 LPXNO60711 386 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 RGS7P49802 495 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 TAP1Q03518 808 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 NOTUMQ6P988 496 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 INTS9Q9NV88 658 aaKnown RBP15.4■□□□□ 0.06
TCOF1-202ENST00000377797 TBK1Q9UHD2 729 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 PLAAQ9Y263 795 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 CTIFO43310 598 aaKnown RBP15.4■□□□□ 0.06
TCOF1-202ENST00000377797 INHBAP08476 426 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 PDGFRBP09619 1106 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 CLK2P49760 499 aaKnown RBP15.4■□□□□ 0.06
TCOF1-202ENST00000377797 ARL13BQ3SXY8 428 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 TRAPPC11Q7Z392 1133 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 HAUS2Q9NVX0 235 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 GTF3C4Q9UKN8 822 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 CASZ1Q86V15 1759 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 CDR2Q01850 454 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 ZNF677Q86XU0 584 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 DNAAF5Q86Y56 855 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 TPCN2Q8NHX9 752 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 AIPL1Q9NZN9 384 aa15.4■□□□□ 0.06
TCOF1-202ENST00000377797 STAMBPO95630 424 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 EGFRP00533 1210 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 TSPY1Q01534 308 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 TREML2Q5T2D2 321 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 C10orf67Q8IYJ2 551 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 REPS2Q8NFH8 660 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 SIK3Q9Y2K2 1263 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 MYH2Q9UKX2 1941 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 FAM187AA6NFU0 413 aa15.39■□□□□ 0.05
TCOF1-202ENST00000377797 MMEP08473 750 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms