RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 DCLRE1AQ6PJP8 1040 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
HMGN4-201ENST00000377575 DYMQ7RTS9 669 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 MAP4K3Q8IVH8 894 aa18.37■□□□□ 0.53
HMGN4-201ENST00000377575 DDX27Q96GQ7 796 aaKnown RBP18.37■□□□□ 0.53
HMGN4-201ENST00000377575 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.37■□□□□ 0.53
HMGN4-201ENST00000377575 TRAPPC3O43617 180 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 CLTAP09496 248 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 GAP43P17677 238 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 NMT1P30419 496 aaKnown RBP18.36■□□□□ 0.53
HMGN4-201ENST00000377575 RTP2Q5QGT7 225 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 ATAT1Q5SQI0 421 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 ATL3Q6DD88 541 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 RNF135Q8IUD6 432 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 C12orf76Q8N812 135 aaPredicted RBP18.36■□□□□ 0.53
HMGN4-201ENST00000377575 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 PIK3R5Q8WYR1 880 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 HVCN1Q96D96 273 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 FIZ1Q96SL8 496 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 ST6GALNAC4Q9H4F1 302 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 POMKQ9H5K3 350 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 PLEKHA5Q9HAU0 1116 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 GOLGA2P5Q9HBQ8 144 aa18.36■□□□□ 0.53
HMGN4-201ENST00000377575 TFIP11Q9UBB9 837 aaKnown RBP18.36■□□□□ 0.53
HMGN4-201ENST00000377575 ANK1P16157 1881 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 MYMKA6NI61 221 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 PODXLO00592 558 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 CUTAO60888 179 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 CXCL8P10145 99 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 PPP2R3AQ06190 1150 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 SOX4Q06945 474 aaPredicted RBP18.35■□□□□ 0.53
HMGN4-201ENST00000377575 PSMD5Q16401 504 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 TMEM31Q5JXX7 168 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 TMC5Q6UXY8 1006 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 C15orf39Q6ZRI6 1047 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 PDILTQ8N807 584 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 CMASQ8NFW8 434 aaPredicted RBP18.35■□□□□ 0.53
HMGN4-201ENST00000377575 HDAC7Q8WUI4 952 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 ZMAT2Q96NC0 199 aaKnown RBP18.35■□□□□ 0.53
HMGN4-201ENST00000377575 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 MUTYHQ9UIF7 546 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 CDH22Q9UJ99 828 aa18.35■□□□□ 0.53
HMGN4-201ENST00000377575 A0A087X0B3 334 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 OGTO15294 1046 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 GPR37L1O60883 481 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 RPL9P32969 192 aaKnown RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 SLC10A6Q3KNW5 377 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 FOXD4L6Q3SYB3 417 aaPredicted RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 SEZ6Q53EL9 994 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 PRSS55Q6UWB4 352 aaPredicted RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 FOXD4L3Q6VB84 417 aaPredicted RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 GPR149Q86SP6 731 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 GLYCTKQ8IVS8 523 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 DNAJC19Q96DA6 116 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 MSTO1Q9BUK6 570 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 PANK2Q9BZ23 570 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 LRRC27Q9C0I9 530 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 HAPLN2Q9GZV7 340 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 TNMDQ9H2S6 317 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 CUEDC2Q9H467 287 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 PLEKHA4Q9H4M7 779 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 MRPL44Q9H9J2 332 aaKnown RBP18.34■□□□□ 0.53
HMGN4-201ENST00000377575 CFAP45Q9UL16 551 aa18.34■□□□□ 0.53
HMGN4-201ENST00000377575 A0A0B4J269 797 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 TGM5O43548 720 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 XPOTO43592 962 aaKnown RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 WEE2P0C1S8 567 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 IDEP14735 1019 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 RPL17P18621 184 aaKnown RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 SP100P23497 879 aaPredicted RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 PKP1Q13835 747 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 ZC2HC1CQ53FD0 456 aaPredicted RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 SLFN12LQ6IEE8 588 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 CYP26C1Q6V0L0 522 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 ZNF720Q7Z2F6 126 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 PALB2Q86YC2 1186 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 C3orf58Q8NDZ4 430 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 LNX1Q8TBB1 728 aaPredicted RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 C18orf25Q96B23 403 aaPredicted RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 TSPAN18Q96SJ8 248 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 RPF1Q9H9Y2 349 aaKnown RBP18.33■□□□□ 0.52
HMGN4-201ENST00000377575 OLFML3Q9NRN5 406 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 EXOC7Q9UPT5 735 aa18.33■□□□□ 0.52
HMGN4-201ENST00000377575 TTC26A0AVF1 554 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 FRMD3A2A2Y4 597 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 MEFVO15553 781 aaPredicted RBP18.32■□□□□ 0.52
HMGN4-201ENST00000377575 FGFR3P22607 806 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 TNFSF9P41273 254 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 ME1P48163 572 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 ALCAMQ13740 583 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 KANK3Q6NY19 840 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 SLC39A4Q6P5W5 647 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 CCDC149Q6ZUS6 474 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 ANKS3Q6ZW76 656 aa18.32■□□□□ 0.52
HMGN4-201ENST00000377575 TDRD5Q8NAT2 981 aaKnown RBP18.32■□□□□ 0.52
HMGN4-201ENST00000377575 KIF12Q96FN5 646 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms