RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CENPTQ96BT3 561 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 TAOK3Q9H2K8 898 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 PABPC3Q9H361 631 aaKnown RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 JPH1Q9HDC5 661 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 A6NNZ2 444 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 DGAT1O75907 488 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 OAS1P00973 400 aaKnown RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 PROZP22891 400 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 CCT5P48643 541 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 HIRAP54198 1017 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MFAP3P55082 362 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 DMP1Q13316 513 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MKRN4PQ13434 485 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MOGSQ13724 837 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 TUBB8Q3ZCM7 444 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 XKR9Q5GH70 373 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 CXorf38Q8TB03 319 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 JPH2Q9BR39 696 aaPredicted RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 PIM2Q9P1W9 311 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 FAM107AO95990 144 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MTMR3Q13615 1198 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 PPP2R5EQ16537 467 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 CEP85LQ5SZL2 805 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 ARHGEF16Q5VV41 709 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 MFSD5Q6N075 450 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 PI4K2AQ9BTU6 479 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 FAM129AQ9BZQ8 928 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 KMT5AQ9NQR1 393 aa10.29□□□□□ -0.76
TRIM39-202ENST00000376659 CNOT7Q9UIV1 285 aaKnown RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF638Q14966 1978 aaKnown RBP10.29□□□□□ -0.76
TRIM39-202ENST00000376659 A0A0B4J269 797 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FAM170AA1A519 330 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 CAND2O75155 1236 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 HSPA6P17066 643 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 ATP1A2P50993 1020 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 NOMO3P69849 1222 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 TNFAIP1Q13829 316 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 SNRNP48Q6IEG0 339 aaKnown RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 ZNF677Q86XU0 584 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 RELL1Q8IUW5 271 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 CCDC26Q8TAB7 109 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 POMGNT1Q8WZA1 660 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 LRRC45Q96CN5 670 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FMO2Q99518 471 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 SLC9A2Q9UBY0 812 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 GSTTP1A0A1W2PQM5 241 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 PTK6Q13882 451 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 TNIP1Q15025 636 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 CYFIP1Q7L576 1253 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 ENOSF1Q7L5Y1 443 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 NLRP14Q86W24 1093 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 GPATCH11Q8N954 259 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 BCAS4Q8TDM0 211 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 MTFR1LQ9H019 292 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 POLR3FQ9H1D9 316 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 EXOC7Q9UPT5 735 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 SNCAIPQ9Y6H5 919 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 IGKV6-21A0A0C4DH24 114 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 RIPK2O43353 540 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FARP2O94887 1054 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FSBPO95073 299 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 MYCLP12524 364 aaPredicted RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 SCP2P22307 547 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 KLRC2P26717 231 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 GRM1Q13255 1194 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 EMC2Q15006 297 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 ERMARDQ5T6L9 678 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 PLEKHA7Q6IQ23 1121 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 LBX2Q6XYB7 198 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 RAB17Q9H0T7 212 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 DPH5Q9H2P9 285 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 ATP6V0A4Q9HBG4 840 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 R3HDM2Q9Y2K5 976 aaKnown RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 UTP11Q9Y3A2 253 aaKnown RBP10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FAM169AQ9Y6X4 670 aa10.28□□□□□ -0.76
TRIM39-202ENST00000376659 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.76
TRIM39-202ENST00000376659 TESPA1A2RU30 521 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 C3orf70A6NLC5 250 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 ZBED4O75132 1171 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 DRD4P21917 467 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 SEC24CP53992 1094 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 DHX9Q08211 1270 aaKnown RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PHF13Q86YI8 300 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 NAP1L3Q99457 506 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PSAPP07602 524 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 CDH5P33151 784 aaPredicted RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 PPP2R2AP63151 447 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 SWSAP1Q6NVH7 229 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 CCDC137Q6PK04 289 aaKnown RBP10.27□□□□□ -0.77
TRIM39-202ENST00000376659 DEFB132Q7Z7B7 95 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 MCPH1Q8NEM0 835 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 DNERQ8NFT8 737 aa10.27□□□□□ -0.77
TRIM39-202ENST00000376659 NSUN6Q8TEA1 469 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms