RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 CRYMQ14894 314 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 ARMC4Q5T2S8 1044 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 RIBC1Q8N443 379 aaPredicted RBP12.21□□□□□ -0.45
VPS13A-205ENST00000376636 MCPH1Q8NEM0 835 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 ANKRD27Q96NW4 1050 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 JAK1P23458 1154 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 GTF2IP78347 998 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 TRPM8Q7Z2W7 1104 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
VPS13A-205ENST00000376636 TRABDQ9H4I3 376 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 TJP2Q9UDY2 1190 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 ARSEP51690 589 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 IDI1Q13907 227 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 PNMA8CA0A1B0GUJ8 204 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 CAND2O75155 1236 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 FLT3P36888 993 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 PHKA2P46019 1235 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 SERPINB9P50453 376 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 ZCWPW2Q504Y3 356 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 SEPT1Q8WYJ6 367 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 PIK3R1P27986 724 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 ATP12AP54707 1039 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 DMPKQ09013 629 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 PTPRN2Q92932 1015 aa12.21□□□□□ -0.45
VPS13A-205ENST00000376636 MAGEA13PA6NCF6 341 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 RGS4P49798 205 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 CYP27A1Q02318 531 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 KYAT1Q16773 422 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 PMF1Q6P1K2 205 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 DENND6AQ8IWF6 608 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 KRT35Q92764 455 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 EDC4Q6P2E9 1401 aaKnown RBP12.21□□□□□ -0.46
VPS13A-205ENST00000376636 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 GNA15P30679 374 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 RGS2P41220 211 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 SLC1A1P43005 524 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 PRPF39Q86UA1 669 aaKnown RBP12.21□□□□□ -0.46
VPS13A-205ENST00000376636 STX12Q86Y82 276 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 WNK4Q96J92 1243 aa12.21□□□□□ -0.46
VPS13A-205ENST00000376636 A0A0D9SFI3 127 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 PNMA6EA0A0J9YXQ4 647 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 TBC1D12O60347 775 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 RGS20O76081 388 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 SEMA3FQ13275 785 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 LRRC41Q15345 812 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 BEST2Q8NFU1 509 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 KANSL2Q9H9L4 492 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
VPS13A-205ENST00000376636 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ARHGEF10O15013 1369 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 TEX14Q8IWB6 1497 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 TSC22D1Q15714 1073 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 FAM9CQ8IZT9 166 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ATP8B4Q8TF62 1192 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 SERPIND1P05546 499 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 PLEKHA7Q6IQ23 1121 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 HDAC6Q9UBN7 1215 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 NPEPPSP55786 919 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 MRPS25P82663 173 aaKnown RBP12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ECSITQ9BQ95 431 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 AVENQ9NQS1 362 aaPredicted RBP12.2□□□□□ -0.46
VPS13A-205ENST00000376636 BTDP43251 543 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 HEMGNQ9BXL5 484 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ENOPH1Q9UHY7 261 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
VPS13A-205ENST00000376636 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 GALNT8Q9NY28 637 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 TRPC5OSA6NMA1 111 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 APOL4Q9BPW4 351 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 OSBPL6Q9BZF3 934 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ATAD3AQ9NVI7 634 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 DLGAP2Q9P1A6 1054 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 FAM153AQ9UHL3 310 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 NCAPHQ15003 741 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 CEP44Q9C0F1 390 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 COPG2Q9UBF2 871 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 TGFBR2P37173 567 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 IP6K1Q92551 441 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 ATXN7L3BQ96GX2 97 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 OSBPL8Q9BZF1 889 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 NDUFB9Q9Y6M9 179 aa12.2□□□□□ -0.46
VPS13A-205ENST00000376636 NEURL1BA8MQ27 555 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 MDH1P40925 334 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PHKA1P46020 1223 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 LCORLQ8N3X6 602 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 HDHD2Q9H0R4 259 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 PKP3Q9Y446 797 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ZHX2Q9Y6X8 837 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 KIAA0586Q9BVV6 1533 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 KIAA0232Q92628 1395 aa12.19□□□□□ -0.46
VPS13A-205ENST00000376636 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 MAGEA10P43363 369 aaPredicted RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 RPS8P62241 208 aaKnown RBP12.19□□□□□ -0.46
VPS13A-205ENST00000376636 ANKRD40Q6AI12 368 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms