RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 PCDHGC5Q9Y5F6 944 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 PSAPP07602 524 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 RXRGP48443 463 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TMEM179Q6ZVK1 233 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 SH3TC2Q8TF17 1288 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 CASP10Q92851 521 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 BHMT2Q9H2M3 363 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 NAGPAQ9UK23 515 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 NCKAP5LQ9HCH0 1330 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TEX33O43247 280 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 CCDC159P0C7I6 412 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 MCAMP43121 646 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 HDLBPQ00341 1268 aaKnown RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 CHRNDQ07001 517 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 HEATR6Q6AI08 1181 aaKnown RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 GRAMD1CQ8IYS0 662 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 SAMD3Q8N6K7 520 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 CEP44Q9C0F1 390 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 ATP11BQ9Y2G3 1177 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TNS3Q68CZ2 1445 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 SETD1AO15047 1707 aaKnown RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 DNAJB2P25686 324 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF200P98182 395 aaPredicted RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 SBK1Q52WX2 424 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 RAD9BQ6WBX8 426 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 STX19Q8N4C7 294 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TPCN2Q8NHX9 752 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 ZNF518BQ9C0D4 1074 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 MROH7-TTC4A0A0A0MT08 1334 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 PRR23AA6NEV1 266 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TSHRP16473 764 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 FMO5P49326 533 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 TBX2Q13207 712 aaPredicted RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 GPR141Q7Z602 305 aa9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 EDC3Q96F86 508 aaKnown RBP9.28□□□□□ -0.92
SHROOM4-202ENST00000376020 ESYT3A0FGR9 886 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 C21orf2O43822 256 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 ADAMTS2O95450 1211 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 NUDT17P0C025 328 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 PMLP29590 882 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 DPH6Q7L8W6 267 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 TLR3O15455 904 aaKnown RBP9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 ATP6V1G2O95670 118 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 EFNA5P52803 228 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 RCN1Q15293 331 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 ABCB5Q2M3G0 1257 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 RGS9BPQ6ZS82 235 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 STK32AQ8WU08 396 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 COPG2Q9UBF2 871 aa9.27□□□□□ -0.92
SHROOM4-202ENST00000376020 AGLP35573 1532 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 M0R3G1 203 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 KPNA4O00629 521 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 EYA4O95677 639 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 FTLP02792 175 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 ADAT2Q7Z6V5 191 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PRPF18Q99633 342 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 SH3GL1Q99961 368 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 NEU2Q9Y3R4 380 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 MAFGO15525 162 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 BARGINQ6ZT62 677 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 MAPKAPK5Q8IW41 473 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 B4GALNT2Q8NHY0 566 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 SDR42E1Q8WUS8 393 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PSPC1Q8WXF1 523 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 C2orf40Q9H1Z8 148 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 MYO3BQ8WXR4 1341 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 TRIP10Q15642 601 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 RGL2O15211 777 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 VAMP7P51809 220 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 TXNRD1Q16881 649 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PPIL6Q8IXY8 311 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 JARID2Q92833 1246 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 FAF2Q96CS3 445 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 CCT7Q99832 543 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 AGPAT1Q99943 283 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 MLXIPQ9HAP2 919 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PLEKHA5Q9HAU0 1116 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 DCDC2Q9UHG0 476 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 STARD13Q9Y3M8 1113 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 RAD51CO43502 376 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 LSM8O95777 96 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 ABHD2P08910 425 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PDIA2Q13087 525 aaKnown RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 TAF12Q16514 161 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 LONP2Q86WA8 852 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 SCUBE1Q8IWY4 988 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 APPL1Q9UKG1 709 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 E2F6O75461 281 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PECAM1P16284 738 aaPredicted RBP9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 PSMC3P17980 439 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 GABPAQ06546 454 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 KIAA0825Q8IV33 1275 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
SHROOM4-202ENST00000376020 METP08581 1390 aa9.26□□□□□ -0.93
SHROOM4-202ENST00000376020 SNTNA6NMZ2 147 aa9.26□□□□□ -0.93
SHROOM4-202ENST00000376020 FAM25AB3EWG3 89 aa9.26□□□□□ -0.93
SHROOM4-202ENST00000376020 FAM25CB3EWG5 89 aa9.26□□□□□ -0.93
SHROOM4-202ENST00000376020 FAM25GB3EWG6 89 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms