RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 NPTXRO95502 500 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 TPBGLP0DKB5 382 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 RARGP13631 454 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 PTPRAP18433 802 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 ATP6V1C1P21283 382 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 GIT2Q14161 759 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 CEP55Q53EZ4 464 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 SLC30A5Q8TAD4 765 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 RAB3IPQ96QF0 476 aaPredicted RBP13.8□□□□□ -0.2
MSH5-204ENST00000375755 TAAR1Q96RJ0 339 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 SLC38A10Q9HBR0 1119 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 ASB3Q9Y575 518 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 DOCK1Q14185 1865 aa13.8□□□□□ -0.2
MSH5-204ENST00000375755 TBX3O15119 743 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 MRPS35P82673 323 aaKnown RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 KCNA1Q09470 495 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 SLC5A9Q2M3M2 681 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 DCAF17Q5H9S7 520 aaPredicted RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 RNF43Q68DV7 783 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 CCDC65Q8IXS2 484 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 LMNTD2Q8IXW0 634 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 STK32AQ8WU08 396 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 TGS1Q96RS0 853 aaKnown RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 KLHL14Q9P2G3 628 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 SBF1O95248 1867 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 PARP14Q460N5 1801 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 PEX5P50542 639 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 MRPS9P82933 396 aaKnown RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 EDRF1Q3B7T1 1238 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 TMEM237Q96Q45 408 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 ZNF577Q9BSK1 485 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 BMP2KQ9NSY1 1161 aaPredicted RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 CYP39A1Q9NYL5 469 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 DNM3Q9UQ16 869 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 TMEM253P0C7T8 217 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 HSD17B4P51659 736 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 PPP1R15BQ5SWA1 713 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 KSR1Q8IVT5 923 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 RPS6KC1Q96S38 1066 aa13.79□□□□□ -0.2
MSH5-204ENST00000375755 ROPN1BQ9BZX4 212 aaPredicted RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 ROPN1Q9HAT0 212 aaPredicted RBP13.79□□□□□ -0.2
MSH5-204ENST00000375755 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.79□□□□□ -0.2
MSH5-204ENST00000375755 RLFQ13129 1914 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 PHIPQ8WWQ0 1821 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 ACSL3O95573 720 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 HOXD13P35453 343 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 MARCKSL1P49006 195 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 BACE1P56817 501 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 FRMD5Q7Z6J6 570 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 SFR1Q86XK3 245 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 FAM13CQ8NE31 585 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 HSD17B14Q9BPX1 270 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 MYLK2Q9H1R3 596 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 COG5Q9UP83 839 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 TMEM150BA6NC51 233 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 GAS7O60861 476 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 CHRNA3P32297 505 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 LBRQ14739 615 aaKnown RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 PARP6Q2NL67 630 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 TCERG1LQ5VWI1 586 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 TMEM154Q6P9G4 183 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 NSMFQ6X4W1 530 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 SYTL5Q8TDW5 730 aaPredicted RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 KRT35Q92764 455 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 GCNT4Q9P109 453 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 PARP2Q9UGN5 583 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 TELO2Q9Y4R8 837 aa13.78□□□□□ -0.2
MSH5-204ENST00000375755 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
MSH5-204ENST00000375755 ABLIM1O14639 778 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 MYCLP12524 364 aaPredicted RBP13.77□□□□□ -0.2
MSH5-204ENST00000375755 XRCC5P13010 732 aaKnown RBP13.77□□□□□ -0.2
MSH5-204ENST00000375755 SGSM1Q2NKQ1 1148 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 ZNF568Q3ZCX4 644 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 CCDC137Q6PK04 289 aaKnown RBP13.77□□□□□ -0.2
MSH5-204ENST00000375755 ZNF280CQ8ND82 737 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 ASAP3Q8TDY4 903 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 CTNNBL1Q8WYA6 563 aaPredicted RBP13.77□□□□□ -0.2
MSH5-204ENST00000375755 LPAR1Q92633 364 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 ART4Q93070 314 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 CDC42EP4Q9H3Q1 356 aaKnown RBP13.77□□□□□ -0.2
MSH5-204ENST00000375755 KCNH7Q9NS40 1196 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 TXLNGQ9NUQ3 528 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.2
MSH5-204ENST00000375755 ADM5C9JUS6 153 aa13.77□□□□□ -0.21
MSH5-204ENST00000375755 E7ENQ6 273 aa13.77□□□□□ -0.21
MSH5-204ENST00000375755 H0Y3Z8 333 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms