RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 TEPSINQ96N21 525 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 NACC1Q96RE7 527 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 HERPUD2Q9BSE4 406 aa15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 GREB1LQ9C091 1923 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-202ENST00000375692 GOLGA8IPA6NC78 632 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 GOLGA8JA6NMD2 632 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 BMP3P12645 472 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ECE1P42892 770 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 PPP2R5CQ13362 524 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ANGEL2Q5VTE6 544 aaKnown RBP15.08■□□□□ 0
CLCNKA-202ENST00000375692 FKBP1CQ5VVH2 108 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 C9orf131Q5VYM1 1079 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 CGB2Q6NT52 195 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 TRMT1LQ7Z2T5 733 aaKnown RBP15.08■□□□□ 0
CLCNKA-202ENST00000375692 FAM83AQ86UY5 434 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ERICH1Q86X53 443 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 CKAP2Q8WWK9 683 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 FAXDC2Q96IV6 333 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 SERPINB12Q96P63 405 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 TRIM7Q9C029 511 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 DEFB129Q9H1M3 183 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 LRRC19Q9H756 370 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 PKD2L1Q9P0L9 805 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 PRR12Q9ULL5 1215 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ARHGEF35A5YM69 484 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 NEBLO76041 1014 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ALADP13716 330 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 FMO1Q01740 532 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 MGAT5Q09328 741 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 SAMD1Q6SPF0 538 aaPredicted RBP15.08■□□□□ 0
CLCNKA-202ENST00000375692 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 GPC2Q8N158 579 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 PSPC1Q8WXF1 523 aaKnown RBP15.08■□□□□ 0
CLCNKA-202ENST00000375692 SLC5A5Q92911 643 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ZNF570Q96NI8 536 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 TGS1Q96RS0 853 aaKnown RBP15.08■□□□□ 0
CLCNKA-202ENST00000375692 FAM118BQ9BPY3 351 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 LXNQ9BS40 222 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 STRA6Q9BX79 667 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 ARL2BPQ9Y2Y0 163 aa15.08■□□□□ 0
CLCNKA-202ENST00000375692 TTC4O95801 387 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 RFX1P22670 979 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 ITGA8P53708 1063 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 CETN1Q12798 172 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 NBPF12Q5TAG4 269 aaPredicted RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 RHBDF2Q6PJF5 856 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 TMEM179Q6ZVK1 233 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 INTS8Q75QN2 995 aaKnown RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 PRUNE1Q86TP1 453 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 ACER1Q8TDN7 264 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 HERC5Q9UII4 1024 aaKnown RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 UBE4BO95155 1302 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 MTA2O94776 668 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 GJB6O95452 261 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 IVDP26440 423 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 DAB2IPQ5VWQ8 1189 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 CCDC174Q6PII3 467 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 SRRM1Q8IYB3 904 aaKnown RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 FAM71AQ8IYT1 594 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 SEMA4DQ92854 862 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 GLIS2Q9BZE0 524 aaPredicted RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 TMEM117Q9H0C3 514 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 ARHGEF3Q9NR81 526 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 NOP53Q9NZM5 478 aaKnown RBP15.07■□□□□ 0
CLCNKA-202ENST00000375692 WHRNQ9P202 907 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 PRKAG3Q9UGI9 489 aa15.07■□□□□ 0
CLCNKA-202ENST00000375692 THAP12O43422 761 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 CYP1A2P05177 515 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 STX2P32856 288 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 MSH2P43246 934 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 C12orf50Q8NA57 414 aaPredicted RBP15.06■□□□□ 0
CLCNKA-202ENST00000375692 ANKLE1Q8NAG6 615 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 CCHCR1Q8TD31 782 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 GMCL1Q96IK5 515 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 ZNF577Q9BSK1 485 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 FSCN2O14926 492 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 CHRM1P11229 460 aaPredicted RBP15.06■□□□□ 0
CLCNKA-202ENST00000375692 GZMAP12544 262 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 GPR162Q16538 588 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 PADI6Q6TGC4 694 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 FAM47EQ6ZV65 393 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 DHX38Q92620 1227 aaKnown RBP15.06■□□□□ 0
CLCNKA-202ENST00000375692 RXFP1Q9HBX9 757 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 SLC24A3Q9HC58 644 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 NINJ2Q9NZG7 142 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 HSPBP1Q9NZL4 362 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 NAALADL1Q9UQQ1 740 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 R3HDM2Q9Y2K5 976 aaKnown RBP15.06■□□□□ 0
CLCNKA-202ENST00000375692 SBF1O95248 1867 aa15.06■□□□□ 0
CLCNKA-202ENST00000375692 ITIH2P19823 946 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 FOXN2P32314 431 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 ADCY8P40145 1251 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 C2CD6Q53TS8 623 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 LLGL2Q6P1M3 1020 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 BZW1Q7L1Q6 419 aaKnown RBP15.05■□□□□ 0
CLCNKA-202ENST00000375692 ASRGL1Q7L266 308 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 MAB21L3Q8N8X9 362 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 GMCL1P1Q8NEA9 526 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 MORC4Q8TE76 937 aa15.05■□□□□ 0
CLCNKA-202ENST00000375692 CCDC127Q96BQ5 260 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms