RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 CLEC14AQ86T13 490 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 NGDNQ8NEJ9 315 aaKnown RBP5.95□□□□□ -1.46
PMS1-202ENST00000374826 ATXN2LQ8WWM7 1075 aaKnown RBP5.95□□□□□ -1.46
PMS1-202ENST00000374826 FERMT2Q96AC1 680 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 HIST1H2AHQ96KK5 128 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 HIST1H2AJQ99878 128 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 PACSIN3Q9UKS6 424 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 ACEP12821 1306 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 MYPNQ86TC9 1320 aa5.95□□□□□ -1.46
PMS1-202ENST00000374826 LMO7Q8WWI1 1683 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 SBNO1A3KN83 1393 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 TOX4O94842 621 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
PMS1-202ENST00000374826 VSIG10L2P0DP72 767 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 FBLP22087 321 aaKnown RBP5.94□□□□□ -1.46
PMS1-202ENST00000374826 CCDC142Q17RM4 750 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 TAF7LQ5H9L4 462 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 ZBTB41Q5SVQ8 909 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 C1QL3Q5VWW1 255 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 KRT40Q6A162 431 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 C11orf74Q86VG3 221 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 ZNF610Q8N9Z0 462 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 LEO1Q8WVC0 666 aaPredicted RBP5.94□□□□□ -1.46
PMS1-202ENST00000374826 RCAN3Q9UKA8 241 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 FZD1Q9UP38 647 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 FAM208AQ9UK61 1670 aaKnown RBP5.94□□□□□ -1.46
PMS1-202ENST00000374826 SPATA31A3Q5VYP0 1347 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 SLIT3O75094 1523 aa5.94□□□□□ -1.46
PMS1-202ENST00000374826 A0A1W2PP64 1363 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 ARHGEF10O15013 1369 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 CPSF1Q10570 1443 aaKnown RBP5.93□□□□□ -1.46
PMS1-202ENST00000374826 LCHNA4D1U4 455 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 GRXCR1A8MXD5 290 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 PCDH8O95206 1070 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 NUDT3O95989 172 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 TMF1P82094 1093 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 TERF2Q15554 542 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 MAN2A1Q16706 1144 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 MDGA1Q8NFP4 955 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 LRRC59Q96AG4 307 aaKnown RBP5.93□□□□□ -1.46
PMS1-202ENST00000374826 PGBD4Q96DM1 585 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 ZNF496Q96IT1 587 aaPredicted RBP5.93□□□□□ -1.46
PMS1-202ENST00000374826 ZNF512Q96ME7 567 aaPredicted RBP5.93□□□□□ -1.46
PMS1-202ENST00000374826 UIMC1Q96RL1 719 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 POLR3GLQ9BT43 218 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 MLST8Q9BVC4 326 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 OSBPL6Q9BZF3 934 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 MS4A5Q9H3V2 200 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 EMC7Q9NPA0 242 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 MAPRE3Q9UPY8 281 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 PCDHB6Q9Y5E3 794 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 SPATA31A6Q5VVP1 1343 aa5.93□□□□□ -1.46
PMS1-202ENST00000374826 KTN1Q86UP2 1357 aaKnown RBP5.93□□□□□ -1.46
PMS1-202ENST00000374826 PEAK1Q9H792 1746 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 A0A0A6YYK5 440 aaPredicted RBP5.92□□□□□ -1.46
PMS1-202ENST00000374826 TLDC2A0PJX2 215 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 FSBPO95073 299 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 JUNP05412 331 aaKnown RBP5.92□□□□□ -1.46
PMS1-202ENST00000374826 NR4A1P22736 598 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 GYS2P54840 703 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 PTPAQ15257 358 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 LY6G5CQ5SRR4 150 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 MEX3CQ5U5Q3 659 aaKnown RBP5.92□□□□□ -1.46
PMS1-202ENST00000374826 NAIF1Q69YI7 327 aaPredicted RBP5.92□□□□□ -1.46
PMS1-202ENST00000374826 SYNE4Q8N205 404 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 CDYL2Q8N8U2 506 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 SOX7Q9BT81 388 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 NFAT5O94916 1531 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 NINLQ9Y2I6 1382 aa5.92□□□□□ -1.46
PMS1-202ENST00000374826 COL4A3Q01955 1670 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 EDC4Q6P2E9 1401 aaKnown RBP5.91□□□□□ -1.46
PMS1-202ENST00000374826 SSH2Q76I76 1423 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 SBF2Q86WG5 1849 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 MTSS1O43312 755 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 ITGB1P05556 798 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 LMO1P25800 156 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 IL12RB1P42701 662 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 KIR2DL3P43628 341 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 DDB1Q16531 1140 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 CXorf67Q86X51 503 aaPredicted RBP5.91□□□□□ -1.46
PMS1-202ENST00000374826 CMTM4Q8IZR5 234 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 PPP1R14CQ8TAE6 165 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 PROKR1Q8TCW9 393 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 SLC5A5Q92911 643 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 USP7Q93009 1102 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 SLC12A5Q9H2X9 1139 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 RIOX1Q9H6W3 641 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.91□□□□□ -1.46
PMS1-202ENST00000374826 NCDNQ9UBB6 729 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 USP18Q9UMW8 372 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 TMA7Q9Y2S6 64 aaKnown RBP5.91□□□□□ -1.46
PMS1-202ENST00000374826 ANKRD36BQ8N2N9 1353 aa5.91□□□□□ -1.46
PMS1-202ENST00000374826 GLI3P10071 1580 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 KDM1AO60341 852 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 IPO13O94829 963 aaKnown RBP5.9□□□□□ -1.46
PMS1-202ENST00000374826 ABHD16AO95870 558 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 PFKMP08237 780 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 DHCR24Q15392 516 aa5.9□□□□□ -1.46
PMS1-202ENST00000374826 BROXQ5VW32 411 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms