RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 BCAR1P56945 870 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 FKBP3Q00688 224 aaKnown RBP16.3■□□□□ 0.2
HSPG2-201ENST00000374673 ZBTB6Q15916 424 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 EPC2Q52LR7 807 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
HSPG2-201ENST00000374673 JADE1Q6IE81 842 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 TTI2Q6NXR4 508 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 KCNT2Q6UVM3 1135 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 RDH13Q8NBN7 331 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 FAM212AQ96EL1 285 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 KIF12Q96FN5 646 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 MFSD14AQ96MC6 490 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 ZNF558Q96NG5 402 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 MKNK1Q9BUB5 465 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 RWDD2AQ9UIY3 292 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 UBQLN1Q9UMX0 589 aaKnown RBP16.3■□□□□ 0.2
HSPG2-201ENST00000374673 C2CD2Q9Y426 696 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 PCDHB12Q9Y5F1 795 aa16.3■□□□□ 0.2
HSPG2-201ENST00000374673 CETN3O15182 167 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 XPOTO43592 962 aaKnown RBP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 LETM1O95202 739 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 GALTP07902 379 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 CYP3A5P20815 502 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 CTNNB1P35222 781 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 PPM1AP35813 382 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 SLC11A1P49279 550 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 CASP4P49662 377 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 SOX4Q06945 474 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 SPAG1Q07617 926 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 CYP24A1Q07973 514 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 PSMD6Q15008 389 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 ZNF697Q5TEC3 545 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 EFCAB13Q8IY85 973 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 UROC1Q96N76 676 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 DUSP9Q99956 384 aaKnown RBP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 TTYH1Q9H313 450 aaPredicted RBP16.29■□□□□ 0.2
HSPG2-201ENST00000374673 FRMD4BQ9Y2L6 1034 aa16.29■□□□□ 0.2
HSPG2-201ENST00000374673 NRP1O14786 923 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 AKAP3O75969 853 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 ALDH2P05091 517 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 NFICP08651 508 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
HSPG2-201ENST00000374673 PSMC2P35998 433 aaKnown RBP16.28■□□□□ 0.2
HSPG2-201ENST00000374673 ALDH7A1P49419 539 aaKnown RBP16.28■□□□□ 0.2
HSPG2-201ENST00000374673 STX17P56962 302 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 TMEM132DQ14C87 1099 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 STX1AQ16623 288 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 SPATA1Q5VX52 437 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 SLC39A11Q8N1S5 342 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 FBXO22Q8NEZ5 403 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 PDE11AQ9HCR9 933 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 ANO10Q9NW15 660 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 FAN1Q9Y2M0 1017 aa16.28■□□□□ 0.2
HSPG2-201ENST00000374673 CASTOR2A6NHX0 329 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 H3BNC9 293 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 SLC16A3O15427 465 aaKnown RBP16.27■□□□□ 0.2
HSPG2-201ENST00000374673 LRPAP1P30533 357 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 PBX3P40426 434 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 OR1G1P47890 313 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 MCCD1P59942 119 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-201ENST00000374673 PLCB3Q01970 1234 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 ENPEPQ07075 957 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 WDR49Q8IV35 697 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 KLHL23Q8NBE8 558 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 BEST2Q8NFU1 509 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 ARNTL2Q8WYA1 636 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 C18orf25Q96B23 403 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-201ENST00000374673 DDX27Q96GQ7 796 aaKnown RBP16.27■□□□□ 0.2
HSPG2-201ENST00000374673 CEP63Q96MT8 703 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 MED15Q96RN5 788 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 FNBP1Q96RU3 617 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 CGRRF1Q99675 332 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 PAAF1Q9BRP4 392 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 C11orf84Q9BUA3 381 aaPredicted RBP16.27■□□□□ 0.2
HSPG2-201ENST00000374673 CERS4Q9HA82 394 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 GOLGA2P5Q9HBQ8 144 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 MARCH5Q9NX47 278 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 SPG21Q9NZD8 308 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 TUBGCP4Q9UGJ1 667 aa16.27■□□□□ 0.2
HSPG2-201ENST00000374673 LAMA3Q16787 3333 aa16.27■□□□□ 0.19
HSPG2-201ENST00000374673 ATG2AQ2TAZ0 1938 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 NT5C1B-RDH14C9J2C7 533 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 TMEM189-UBE2V1I3L0A0 370 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 FGF18O76093 207 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 EPB41P11171 864 aaKnown RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 RPL9P32969 192 aaKnown RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 CLCNKBP51801 687 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 CLDN10P78369 228 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 TYRO3Q06418 890 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 UPP1Q16831 310 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 INTS8Q75QN2 995 aaKnown RBP16.26■□□□□ 0.19
HSPG2-201ENST00000374673 FILIP1Q7Z7B0 1213 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 CSGALNACT2Q8N6G5 542 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 PLEKHO2Q8TD55 490 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 TMC2Q8TDI7 906 aa16.26■□□□□ 0.19
HSPG2-201ENST00000374673 PARD3BQ8TEW8 1205 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms