RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 AP5Z1O43299 807 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 LPXNO60711 386 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 TNFSF9P41273 254 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 GRM5P41594 1212 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 VAMP7P51809 220 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 OSTNP61366 133 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 VWA3BQ502W6 1294 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 UBXN11Q5T124 520 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 CRELD2Q6UXH1 353 aaPredicted RBP19■□□□□ 0.63
PFDN6-201ENST00000374606 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
PFDN6-201ENST00000374606 CCDC94Q9BW85 323 aaPredicted RBP19■□□□□ 0.63
PFDN6-201ENST00000374606 EIF2AQ9BY44 585 aaKnown RBP19■□□□□ 0.63
PFDN6-201ENST00000374606 XPO4Q9C0E2 1151 aaKnown RBP19■□□□□ 0.63
PFDN6-201ENST00000374606 C11orf16Q9NQ32 467 aa19■□□□□ 0.63
PFDN6-201ENST00000374606 A0A1B0GTH6 734 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 LRRC10BA6NIK2 292 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 LGALS16A8MUM7 142 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 TULP1O00294 542 aaPredicted RBP18.99■□□□□ 0.63
PFDN6-201ENST00000374606 NBNO60934 754 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 CLTAP09496 248 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 STAG3L1P0CL83 205 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 ENPEPQ07075 957 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 TMC2Q8TDI7 906 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 KHSRPQ92945 711 aaKnown RBP eCLIP18.99■□□□□ 0.63
PFDN6-201ENST00000374606 SLC35C1Q96A29 364 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 CCDC127Q96BQ5 260 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 MFSD14AQ96MC6 490 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 TMX1Q9H3N1 280 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 RPF1Q9H9Y2 349 aaKnown RBP18.99■□□□□ 0.63
PFDN6-201ENST00000374606 LMCD1Q9NZU5 365 aa18.99■□□□□ 0.63
PFDN6-201ENST00000374606 PTPRSQ13332 1948 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 FAM86C2PA6NEL3 165 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 TRIM49P0CI25 452 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 TRIM49CP0CI26 452 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 CXCL8P10145 99 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 RAB27AP51159 221 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 ZNF75DP51815 510 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 DSC3Q14574 896 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 PSMD6Q15008 389 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 SURF1Q15526 300 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 MIIPQ5JXC2 388 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 FAM43BQ6ZT52 329 aaPredicted RBP18.98■□□□□ 0.63
PFDN6-201ENST00000374606 SPRED2Q7Z698 418 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 HACE1Q8IYU2 909 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 SEPT8Q92599 483 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 APBB2Q92870 758 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 FNBP1Q96RU3 617 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 FTHL17Q9BXU8 183 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 NDST4Q9H3R1 872 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 NXF3Q9H4D5 531 aaKnown RBP18.98■□□□□ 0.63
PFDN6-201ENST00000374606 FAM105AQ9NUU6 356 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 ANK1P16157 1881 aa18.98■□□□□ 0.63
PFDN6-201ENST00000374606 CITO14578 2027 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 LCHNA4D1U4 455 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 PI4K2BG5E9Z4 385 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 RBAK-RBAKDNI3L0D1 243 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 STX10O60499 249 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 MGEA5O60502 916 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 IL18RAPO95256 599 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 ADCY5O95622 1261 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 AFPP02771 609 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 YARSP54577 528 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 WDR5P61964 334 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 POU5F1Q01860 360 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 KCNH2Q12809 1159 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 ENOX2Q16206 610 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 PLEKHG4Q58EX7 1191 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 FKBP15Q5T1M5 1219 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 TMEM192Q8IY95 271 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 PARD3BQ8TEW8 1205 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 GDPD5Q8WTR4 605 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 FAM212AQ96EL1 285 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 NAP1L5Q96NT1 182 aaPredicted RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 ACAP3Q96P50 834 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 ADAM2Q99965 735 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 ZBED2Q9BTP6 218 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
PFDN6-201ENST00000374606 SNTG2Q9NY99 539 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 IPPQ9Y573 584 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 PCDHB2Q9Y5E7 798 aa18.97■□□□□ 0.63
PFDN6-201ENST00000374606 LRRIQ3A6PVS8 624 aaPredicted RBP18.96■□□□□ 0.63
PFDN6-201ENST00000374606 CXCL10P02778 98 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 DLATP10515 647 aaKnown RBP18.96■□□□□ 0.63
PFDN6-201ENST00000374606 SKIP12755 728 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 DLG4P78352 724 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 GPNMBQ14956 572 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 DBF4BQ8NFT6 615 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 PLEKHO2Q8TD55 490 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 MRFAP1L1Q96HT8 127 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 CGRRF1Q99675 332 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 TRAIPQ9BWF2 469 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 APOL6Q9BWW8 343 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 MMRN2Q9H8L6 949 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 PDE11AQ9HCR9 933 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 TOPORSQ9NS56 1045 aaPredicted RBP18.96■□□□□ 0.63
PFDN6-201ENST00000374606 HES2Q9Y543 173 aa18.96■□□□□ 0.63
PFDN6-201ENST00000374606 N4BP1O75113 896 aaKnown RBP18.95■□□□□ 0.62
PFDN6-201ENST00000374606 RECQL4O94761 1208 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 MYL7Q01449 175 aa18.95■□□□□ 0.62
PFDN6-201ENST00000374606 UBXN1Q04323 297 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms