RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 IGHA2P01877 340 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 FGGP02679 453 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 PDE6CP51160 858 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 MCCD1P59942 119 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 HLTFQ14527 1009 aaKnown RBP eCLIP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 MAATS1Q7Z4T9 603 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 CCDC26Q8TAB7 109 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 SHC3Q92529 594 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM143Q96AN5 459 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 LENG1Q96BZ8 264 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 NAP1L3Q99457 506 aaPredicted RBP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 DDX47Q9H0S4 455 aaKnown RBP12.99□□□□□ -0.33
HMGCL-202ENST00000374487 KIAA1586Q9HCI6 787 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 PCDH10Q9P2E7 1040 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 ARHGAP28Q9P2N2 729 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 COG5Q9UP83 839 aa12.99□□□□□ -0.33
HMGCL-202ENST00000374487 OATP04181 439 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 FAM153BP0C7A2 387 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 GZMAP12544 262 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ICAM3P32942 547 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 GUCY2FP51841 1108 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 FAM153CQ494X1 144 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 MAP3K21Q5TCX8 1036 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 TSEN2Q8NCE0 465 aaKnown RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 HELQQ8TDG4 1101 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 WHAMMQ8TF30 809 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 FNBP1Q96RU3 617 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ACP6Q9NPH0 428 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 FAM153AQ9UHL3 310 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 NOCTQ9UK39 431 aaKnown RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 MAFBQ9Y5Q3 323 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ALG6Q9Y672 507 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ZNFX1Q9P2E3 1918 aaKnown RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 GOLGA6CA6NDK9 693 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 LRRIQ4A6NIV6 560 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM110-MUSTN1A8MSY1 372 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 K7ERI5 159 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 EXTL3O43909 919 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 MMEP08473 750 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 GOLGA6DP0CG33 693 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ITGA4P13612 1032 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 KRT5P13647 590 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 CYP11B1P15538 503 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ALDH5A1P51649 535 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 HADHBP55084 474 aaKnown RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM63BQ5T3F8 832 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 ABRAQ8N0Z2 381 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 UBL4BQ8N7F7 174 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 DEPTORQ8TB45 409 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 PCDHB18PQ96TA0 734 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 TMEM106CQ9BVX2 250 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 CARD9Q9H257 536 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 GOLGA6AQ9NYA3 693 aa12.98□□□□□ -0.33
HMGCL-202ENST00000374487 KIAA0100Q14667 2235 aaKnown RBP12.98□□□□□ -0.33
HMGCL-202ENST00000374487 SYNGAP1Q96PV0 1343 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 DDX3YO15523 660 aaKnown RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 ATG7O95352 703 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 SNAI1O95863 264 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CHRNB2P17787 502 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TNNI1P19237 187 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CUL1Q13616 776 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TRADDQ15628 312 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CLUL1Q15846 466 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CFAP58Q5T655 872 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 LEKR1Q6ZMV7 388 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TAS1R3Q7RTX0 852 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TATDN2Q93075 761 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 RNPC3Q96LT9 517 aaKnown RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 SLITRK6Q9H5Y7 841 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 C1orf112Q9NSG2 853 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 AMACRQ9UHK6 382 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TTC7AQ9ULT0 858 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 GOLGA6L10A0A0M3HER8 536 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 MIF4GDA9UHW6 222 aaKnown RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 GOLGA8KD6RF30 607 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 ATP4AP20648 1035 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CDR2Q01850 454 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 ENPEPQ07075 957 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 PPFIA1Q13136 1202 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 MESDQ14696 234 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 WDR44Q5JSH3 913 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 NAA35Q5VZE5 725 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 C11orf63Q6NUN7 778 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 ENOSF1Q7L5Y1 443 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 EEPD1Q7L9B9 569 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 EIF1ADQ8N9N8 165 aaKnown RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 FAM76AQ8TAV0 307 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 ELMO3Q96BJ8 720 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 PI4K2AQ9BTU6 479 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 PAK6Q9NQU5 681 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 NRBP2Q9NSY0 501 aa12.97□□□□□ -0.33
HMGCL-202ENST00000374487 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 AGO2Q9UKV8 859 aaKnown RBP12.97□□□□□ -0.33
HMGCL-202ENST00000374487 TNRC18O15417 2968 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms