RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PCDHB2Q9Y5E7 798 aa13.52□□□□□ -0.25
PRPF4-202ENST00000374199 CLDN3O15551 220 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 FTCDO95954 541 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 MMEP08473 750 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 INSRRP14616 1297 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 CDH5P33151 784 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 TNFSF9P41273 254 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ADCYAP1R1P41586 468 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 PTP4A2Q12974 167 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ACVR2BQ13705 512 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 LONRF2Q1L5Z9 754 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ACAD10Q6JQN1 1059 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 EFCAB12Q6NXP0 572 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 TMCO3Q6UWJ1 677 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 RNF149Q8NC42 400 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 PRMT7Q9NVM4 692 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 IGF2BP3O00425 579 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 F2P00734 622 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 CTNNA2P26232 953 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 PEX5P50542 639 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 GPC5P78333 572 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ENOX2Q16206 610 aaKnown RBP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 DNAAF5Q86Y56 855 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 RBM12Q9NTZ6 932 aaKnown RBP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 UVRAGQ9P2Y5 699 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 TCRBV5S1A1TA0A578 114 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 MCF2P10911 925 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 SCARA3Q6AZY7 606 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 CCNI2Q6ZMN8 369 aaPredicted RBP13.51□□□□□ -0.25
PRPF4-202ENST00000374199 MON1BQ7L1V2 547 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 PPM1KQ8N3J5 372 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 METTL13Q8N6R0 699 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 CARD9Q9H257 536 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 ARFGAP3Q9NP61 516 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 GJD2Q9UKL4 321 aa13.51□□□□□ -0.25
PRPF4-202ENST00000374199 MANSC4A6NHS7 340 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 IL18RAPO95256 599 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 SLC10A3P09131 477 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 GSCP56915 257 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 C2orf54Q08AI8 447 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 KYAT1Q16773 422 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 ZNF410Q86VK4 478 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 LRRC71Q8N4P6 559 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 AFG1LQ8WV93 481 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 TRAPPC12Q8WVT3 735 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 CTNNBL1Q8WYA6 563 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 TAF4BQ92750 862 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 VCPIP1Q96JH7 1222 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 ARID3AQ99856 593 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 BCO2Q9BYV7 579 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 CDT1Q9H211 546 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 PDZD7Q9H5P4 517 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 C1orf112Q9NSG2 853 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 MYBL1P10243 752 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 DLATP10515 647 aaKnown RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 MARK3P27448 753 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 BPIFB4P59827 614 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 RPS6KA1Q15418 735 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 ATF7IP2Q5U623 682 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 PPP1R2P3Q6NXS1 205 aa13.5□□□□□ -0.25
PRPF4-202ENST00000374199 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
PRPF4-202ENST00000374199 SCN10AQ9Y5Y9 1956 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 AARSP49588 968 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 PDE6CP51160 858 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 MAP2K5Q13163 448 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 TRIM72Q6ZMU5 477 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 PHF13Q86YI8 300 aaPredicted RBP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 EFCAB13Q8IY85 973 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 KAT2BQ92831 832 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 CAPZA3Q96KX2 299 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.49□□□□□ -0.253e-6■■■□□ 15.6
PRPF4-202ENST00000374199 FLRT1Q9NZU1 646 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 CITO14578 2027 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 SEC31AO94979 1220 aaKnown RBP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 ASPAP45381 313 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 MS4A14Q96JA4 679 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 DOCK3Q8IZD9 2030 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 GPR32O75388 356 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 CTNNA1P35221 906 aaKnown RBP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 NOP14P78316 857 aaKnown RBP13.49□□□□□ -0.25
PRPF4-202ENST00000374199 KIAA0319LQ8IZA0 1049 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 HHIPL1Q96JK4 782 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 FNBP1Q96RU3 617 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 LRRC1Q9BTT6 524 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 EHD2Q9NZN4 543 aa13.49□□□□□ -0.25
PRPF4-202ENST00000374199 A0A1B0GUA9 196 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 MIF4GDA9UHW6 222 aaKnown RBP13.48□□□□□ -0.25
PRPF4-202ENST00000374199 B4GALT5O43286 388 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 CXCR5P32302 372 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 PIK3CAP42336 1068 aa13.48□□□□□ -0.25
PRPF4-202ENST00000374199 PHKA2P46019 1235 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms