RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 HSD17B3P37058 310 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 MMP16P51512 607 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ADARP55265 1226 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 OCRLQ01968 901 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 RCN2Q14257 317 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 KPNB1Q14974 876 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 LIN52Q52LA3 116 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 GRAMD4Q6IC98 578 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 NEPROQ6NW34 567 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 HEATR3Q7Z4Q2 680 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 DEFB132Q7Z7B7 95 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 DAAM2Q86T65 1068 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 IFT81Q8WYA0 676 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 TAF4BQ92750 862 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ABTB1Q969K4 478 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 CGREF1Q99674 301 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 HNRNPABQ99729 332 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 PYM1Q9BRP8 204 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 CENPKQ9BS16 269 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 NSRP1Q9H0G5 558 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 EPB41L5Q9HCM4 733 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 FAM114A2Q9NRY5 505 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 TTLL3Q9Y4R7 772 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 PPEF1O14829 653 aaPredicted RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ATP9AO75110 1047 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 HEXIM1O94992 359 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 PDGFAP04085 211 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 NOVP48745 357 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 MAGOHP61326 146 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 PALB2Q86YC2 1186 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 MAP7D3Q8IWC1 876 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 LRRC34Q8IZ02 419 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 DIS3LQ8TF46 1054 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ATXN2LQ8WWM7 1075 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 CASKIN2Q8WXE0 1202 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 JDP2Q8WYK2 163 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 MAGOHBQ96A72 148 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 TLCD1Q96CP7 247 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 OLFM3Q96PB7 478 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ELAC2Q9BQ52 826 aaKnown RBP9.44□□□□□ -0.9
ATG4A-203ENST00000372232 SPZ1Q9BXG8 430 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 NMRK1Q9NWW6 199 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ARHGEF38Q9NXL2 777 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ATP6V0A2Q9Y487 856 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 DAGLAQ9Y4D2 1042 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 PCDHB3Q9Y5E6 796 aa9.44□□□□□ -0.9
ATG4A-203ENST00000372232 ASMTLO95671 621 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 APBA3O96018 575 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 POTEJP0CG39 1038 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 VHLP40337 213 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 HALP42357 657 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 PAFAH1B1P43034 410 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 MATR3P43243 847 aaKnown RBP eCLIP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SERPINB8P50452 374 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 PMS2P54278 862 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 UAP1Q16222 522 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 TXNRD1Q16881 649 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 MSS51Q4VC12 460 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SH3PXD2AQ5TCZ1 1133 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 FAAH2Q6GMR7 532 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 ANKS3Q6ZW76 656 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SYT2Q8N9I0 419 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 STAMQ92783 540 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 LRRC45Q96CN5 670 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 ZMAT2Q96NC0 199 aaKnown RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 NUP88Q99567 741 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SH3GL1Q99961 368 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 IL1RAPL1Q9NZN1 696 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 HYOU1Q9Y4L1 999 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 USP3Q9Y6I4 520 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 NAV1Q8NEY1 1877 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 KANSL1LA0AUZ9 987 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 CCDC162PA2VCL2 907 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 O00370 1275 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SNX3O60493 162 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 PYGMP11217 842 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 DHX9Q08211 1270 aaKnown RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 WASHC2DQ5SRD0 308 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 OLFML2BQ68BL8 750 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 SMYD4Q8IYR2 804 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 MORC4Q8TE76 937 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 NAT14Q8WUY8 206 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 ZMYND12Q9H0C1 365 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 BLZF1Q9H2G9 400 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 CPVLQ9H3G5 476 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 RBM12Q9NTZ6 932 aaKnown RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 FAIMQ9NVQ4 179 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 RABL2AQ9UBK7 228 aaPredicted RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 RPL26L1Q9UNX3 145 aaKnown RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 TFR2Q9UP52 801 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 VPS9D1Q9Y2B5 631 aa9.43□□□□□ -0.9
ATG4A-203ENST00000372232 LUC7L2Q9Y383 392 aaKnown RBP9.43□□□□□ -0.9
ATG4A-203ENST00000372232 ECE2O60344 883 aa9.42□□□□□ -0.9
ATG4A-203ENST00000372232 LMNAP02545 664 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms