RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 WNT8AQ9H1J5 351 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 TRIM49BA6NDI0 452 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 TRIM49D1C9J1S8 452 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 PIK3R1P27986 724 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 R3HDM1Q15032 1099 aaKnown RBP16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 PRUNE1Q86TP1 453 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 ANKRD27Q96NW4 1050 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 ATP6V1HQ9UI12 483 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 OSTNP61366 133 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 CROCCP3Q8IVE0 287 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 PNMA1Q8ND90 353 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 PACSIN1Q9BY11 444 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 BCL2L14Q9BZR8 327 aa16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 ZNF624Q9P2J8 865 aaPredicted RBP16.06■□□□□ 0.16
GTF3C4-201ENST00000372146 NQO1P15559 274 aaKnown RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ARF4P18085 180 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 EIF2B5Q13144 721 aaKnown RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 SGSM3Q96HU1 749 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 TRAPPC9Q96Q05 1148 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PGM3O95394 542 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ARPP19P56211 112 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 USP39Q53GS9 565 aaKnown RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 APOL4Q9BPW4 351 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 EURLQ9NYK6 297 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 VSNL1P62760 191 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 STAT4Q14765 748 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ALFQ53S48 1182 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 C1orf54Q8WWF1 131 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 AVENQ9NQS1 362 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PCMTD2Q9NV79 361 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PCDHA4Q9UN74 947 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 GCC2Q8IWJ2 1684 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 DUOX2Q9NRD8 1548 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 FOSP01100 380 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 DCUN1D5Q9BTE7 237 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 CCDC28BQ9BUN5 200 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 POLD4Q9HCU8 107 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PALD1Q9ULE6 856 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ARHGEF37A1IGU5 675 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PDIA3P30101 505 aaKnown RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 TRIM32Q13049 653 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 VTA1Q9NP79 307 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 LCMT1Q9UIC8 334 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 MAP3K19Q56UN5 1328 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 EIF2S3P41091 472 aaKnown RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 UTS2BQ765I0 119 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 MNTQ99583 582 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 POLR1AO95602 1720 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 MED26O95402 600 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 CALB1P05937 261 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ZAP70P43403 619 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 EAPPQ56P03 285 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 ZNF467Q7Z7K2 595 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 KRCC1Q9NPI7 259 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 PSMC3IPQ9P2W1 217 aaPredicted RBP16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 AMACRQ9UHK6 382 aa16.05■□□□□ 0.16
GTF3C4-201ENST00000372146 GGPS1O95749 300 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 TMEM63BQ5T3F8 832 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 PAGE5Q96GU1 130 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 C14orf93Q9H972 538 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ADAM22Q9P0K1 906 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 TRPM2O94759 1503 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 INO80B-WBP1J3KQ70 363 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 IDH3BO43837 385 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MLNP12872 115 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ABATP80404 500 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 CHID1Q9BWS9 393 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 INO80BQ9C086 356 aaPredicted RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ASNSD1Q9NWL6 643 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MRPL11Q9Y3B7 192 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 KIZQ2M2Z5 673 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ZFRQ96KR1 1074 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 SLITRK6Q9H5Y7 841 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 CNOT8Q9UFF9 292 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MYO3BQ8WXR4 1341 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 E2F8A0AVK6 867 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ATP9AO75110 1047 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 C1DQ13901 141 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 KBTBD12Q3ZCT8 623 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 SDR42E1Q8WUS8 393 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 PGBD4Q96DM1 585 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 WDR7Q9Y4E6 1490 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MTTPP55157 894 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 HPCAP84074 193 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 P3H1Q32P28 736 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 Q3C1V9 767 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ABI1Q8IZP0 508 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 MANSC1Q9H8J5 431 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 SASH1O94885 1247 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 C1orf228Q6PIY5 440 aa16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 ZCCHC7Q8N3Z6 543 aaKnown RBP16.04■□□□□ 0.16
GTF3C4-201ENST00000372146 RBBP8NLQ8NC74 664 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms