RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 SP100P23497 879 aaPredicted RBP16.61■□□□□ 0.25
SS18L1-202ENST00000370848 KLRC2P26717 231 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
SS18L1-202ENST00000370848 GLUD2P49448 558 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 SCNN1GP51170 649 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 GRIK3Q13003 919 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 ZBTB33Q86T24 672 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 SFR1Q86XK3 245 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 HACE1Q8IYU2 909 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 CEP120Q8N960 986 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 ACO2Q99798 780 aaKnown RBP16.61■□□□□ 0.25
SS18L1-202ENST00000370848 SNTG2Q9NY99 539 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 FNIP2Q9P278 1114 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 LARSQ9P2J5 1176 aaKnown RBP16.61■□□□□ 0.25
SS18L1-202ENST00000370848 PARP2Q9UGN5 583 aa16.61■□□□□ 0.25
SS18L1-202ENST00000370848 RBM19Q9Y4C8 960 aaKnown RBP16.61■□□□□ 0.25
SS18L1-202ENST00000370848 DOCK8Q8NF50 2099 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 ABLIM1O14639 778 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 POLR2DO15514 142 aaKnown RBP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 TRAK2O60296 914 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 CA8P35219 290 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 CLCN5P51795 746 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 SMTNP53814 917 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 LILRA6Q6PI73 481 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 TAS1R1Q7RTX1 841 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 HAUS6Q7Z4H7 955 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 ACSF2Q96CM8 615 aaPredicted RBP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 ZBTB45Q96K62 511 aaPredicted RBP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 MRPL4Q9BYD3 311 aaKnown RBP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 CDT1Q9H211 546 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 PLEKHA4Q9H4M7 779 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 PTPRHQ9HD43 1115 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 WDR6Q9NNW5 1121 aaKnown RBP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.6■□□□□ 0.25
SS18L1-202ENST00000370848 DUSP12Q9UNI6 340 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 TNFSF13BQ9Y275 285 aa16.6■□□□□ 0.25
SS18L1-202ENST00000370848 ZFHX2Q9C0A1 2572 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 N4BP1O75113 896 aaKnown RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ASGR2P07307 311 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 HARSP12081 509 aaKnown RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 CASP1P29466 404 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 OR1G1P47890 313 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 NUCB2P80303 420 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 NAB2Q15742 525 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ZNF568Q3ZCX4 644 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ZC2HC1CQ53FD0 456 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ELMSAN1Q6PJG2 1045 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 TMEM105Q8N8V8 129 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ZNF707Q96C28 371 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ADPGKQ9BRR6 497 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 FGFBP2Q9BYJ0 223 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 IKZF4Q9H2S9 585 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 SMOC2Q9H3U7 446 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 MAN1C1Q9NR34 630 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ZDHHC7Q9NXF8 308 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 TBC1D7Q9P0N9 293 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 IGSF9Q9P2J2 1179 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 EPS15L1Q9UBC2 864 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 LIMD1Q9UGP4 676 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 GDAQ9Y2T3 454 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 PRG3Q9Y2Y8 225 aaPredicted RBP16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ATP6V1DQ9Y5K8 247 aa16.59■□□□□ 0.25
SS18L1-202ENST00000370848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.24
SS18L1-202ENST00000370848 A0A1B0GVL5 298 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 F8W810 466 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 NR1I2O75469 434 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 RECQL4O94761 1208 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 GLUD1P00367 558 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 IDEP14735 1019 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 PFKFB1P16118 471 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 PROZP22891 400 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 CREMQ03060 361 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 STRN3Q13033 797 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 TDGQ13569 410 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 DCAF4L1Q3SXM0 396 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 ASTLQ6HA08 431 aaPredicted RBP16.58■□□□□ 0.24
SS18L1-202ENST00000370848 FUT10Q6P4F1 479 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 GRAMD1CQ8IYS0 662 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 COLEC11Q9BWP8 271 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 GPR62Q9BZJ7 368 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 HAPLN2Q9GZV7 340 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 KBTBD4Q9NVX7 518 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 ANKFY1Q9P2R3 1169 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 CACNG4Q9UBN1 327 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 KCNH3Q9ULD8 1083 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 TBX20Q9UMR3 447 aa16.58■□□□□ 0.24
SS18L1-202ENST00000370848 CLUHO75153 1309 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 NBL1P41271 181 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 OSTNP61366 133 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 USP41Q3LFD5 358 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 SEZ6Q53EL9 994 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 CWF19L1Q69YN2 538 aaKnown RBP16.57■□□□□ 0.24
SS18L1-202ENST00000370848 ADALQ6DHV7 355 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 SLC39A4Q6P5W5 647 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 HPS3Q969F9 1004 aa16.57■□□□□ 0.24
SS18L1-202ENST00000370848 NXPE3Q969Y0 559 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms