RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 INSRRP14616 1297 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 CRYBB1P53674 252 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 LBRQ14739 615 aaKnown RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 PCBP1Q15365 356 aaKnown RBP eCLIP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ATL3Q6DD88 541 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 KRT25Q7Z3Z0 450 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 HIPK3Q9H422 1215 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 PLEKHA4Q9H4M7 779 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 WDR37Q9Y2I8 494 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 C5orf60A6NFR6 353 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 BTBD18B2RXH4 712 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 H3BNC9 293 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 KIAA0754O94854 1291 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 GLP2RO95838 553 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 RARRES1P49788 294 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 GRIN2CQ14957 1233 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 NOSTRINQ8IVI9 506 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 SMYD1Q8NB12 490 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 SLC22A17Q8WUG5 538 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 P2RX5Q93086 422 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 HSD3B7Q9H2F3 369 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ZWILCHQ9H900 591 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ANKEF1Q9NU02 776 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 LAD1O00515 517 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 KIF5CO60282 957 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 CYP2C9P11712 490 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ZNF24P17028 368 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 TPP2P29144 1249 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 PLCB3Q01970 1234 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 MRPL58Q14197 206 aaKnown RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 ARL6IP4Q66PJ3 421 aaKnown RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 TAF2Q6P1X5 1199 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 PDXDC2PQ6P474 469 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 NSMFQ6X4W1 530 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 HOMER1Q86YM7 354 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 CEP57L1Q8IYX8 460 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 VAT1LQ9HCJ6 419 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 PAPOLBQ9NRJ5 636 aaKnown RBP7.43□□□□□ -1.22
CSDE1-204ENST00000369530 AGPAT5Q9NUQ2 364 aa7.43□□□□□ -1.22
CSDE1-204ENST00000369530 C17orf102A2RUQ5 167 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA6CA6NDK9 693 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA6BA6NDN3 693 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 RRN3P2A6NIE6 340 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 C6orf222P0C671 652 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA6DP0CG33 693 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 IDO1P14902 403 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CNGA1P29973 690 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PEX19P40855 299 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 JAK3P52333 1124 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 AMPD2Q01433 879 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 MYBPC3Q14896 1274 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 VSTM4Q8IW00 320 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 ELOA2Q8IYF1 753 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CMTR2Q8IYT2 770 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 XPO4Q9C0E2 1151 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 EPN3Q9H201 632 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 MARCH5Q9NX47 278 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA6AQ9NYA3 693 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 MYO1AQ9UBC5 1043 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 LZTS1Q9Y250 596 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 A0A0C4DFX4 3053 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PDE4DIPQ5VU43 2346 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GOLGA6L7A0A1B0GV03 622 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 BMP1P13497 986 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 MYOGP15173 224 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 SYN1P17600 705 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 NAA25Q14CX7 972 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 KDM7AQ6ZMT4 941 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 NEK8Q86SG6 692 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PDILTQ8N807 584 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CFAP61Q8NHU2 1237 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 WASF1Q92558 559 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 SCLYQ96I15 445 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 RMDN2Q96LZ7 410 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CDX2Q99626 313 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 ARPC5LQ9BPX5 153 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 NUP58Q9BVL2 599 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 MMADHCQ9H3L0 296 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 UTP6Q9NYH9 597 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 NOC2LQ9Y3T9 749 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PCDHA10Q9Y5I2 948 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CNTNAP2Q9UHC6 1331 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 A0A087WWV3 80 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 TMEM189-UBE2V1I3L0A0 370 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 SPTLC2O15270 562 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 HBP1O60381 514 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 LUC7L3O95232 432 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 DARSP14868 501 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GNA11P29992 359 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 SARSP49591 514 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 DYNC1I2Q13409 638 aaKnown RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 THEMIS2Q5TEJ8 643 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 SFMBT2Q5VUG0 894 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 EXOC8Q8IYI6 725 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 PIAS4Q8N2W9 510 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-204ENST00000369530 CCDC148Q8NFR7 591 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 FEZF2Q8TBJ5 459 aa7.42□□□□□ -1.22
CSDE1-204ENST00000369530 GLT1D1Q96MS3 346 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms