RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CES5AQ6NT32 575 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 ANO5Q75V66 913 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 MIER3Q7Z3K6 550 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 KSR1Q8IVT5 923 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
TPM3-210ENST00000368530 GLIS3Q8NEA6 775 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 RDM1Q8NG50 284 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 PIGOQ8TEQ8 1089 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 NLRP7Q8WX94 980 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 DHTKD1Q96HY7 919 aaPredicted RBP10.9□□□□□ -0.66
TPM3-210ENST00000368530 SNX27Q96L92 541 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 MRPL9Q9BYD2 267 aaKnown RBP10.9□□□□□ -0.66
TPM3-210ENST00000368530 GCOM2Q9BZD3 368 aaPredicted RBP10.9□□□□□ -0.66
TPM3-210ENST00000368530 BHMT2Q9H2M3 363 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 TBC1D13Q9NVG8 400 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 INTS13Q9NVM9 706 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 DNAJB4Q9UDY4 337 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 PYCARDQ9ULZ3 195 aa10.9□□□□□ -0.66
TPM3-210ENST00000368530 ZBTB39O15060 712 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 SLITRK3O94933 977 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 MTHFRP42898 656 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 AFF1P51825 1210 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 CDC42EP1Q00587 391 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 MTMR3Q13615 1198 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 EPHA7Q15375 998 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 MTERF2Q49AM1 385 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 RARS2Q5T160 578 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 ANKRD40Q6AI12 368 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ZNF280BQ86YH2 543 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 CCDC65Q8IXS2 484 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 CACTINQ8WUQ7 758 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 RSPH1Q8WYR4 309 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ATOH1Q92858 354 aaPredicted RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 TMEM169Q96HH4 297 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 HSD17B14Q9BPX1 270 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 RUSC1Q9BVN2 902 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 SRRTQ9BXP5 876 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 IRF2BPLQ9H1B7 796 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 POLD4Q9HCU8 107 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 FAM105AQ9NUU6 356 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 LIMD1Q9UGP4 676 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 TCEAL9Q9UHQ7 104 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 USTQ9Y2C2 406 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 DMDP11532 3685 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 PLXNA3P51805 1871 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 MYO10Q9HD67 2058 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 KCNJ18B7U540 433 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ZC3H11AO75152 810 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM3-210ENST00000368530 DDHD2O94830 711 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 CCNE1P24864 410 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 SLC11A1P49279 550 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 GIT2Q14161 759 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 KCNJ12Q14500 433 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 KRT31Q15323 416 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 PTPN14Q15678 1187 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 NOMO2Q5JPE7 1267 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 FAM26FQ5R3K3 315 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ATAT1Q5SQI0 421 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 TTI2Q6NXR4 508 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 AGMOQ6ZNB7 445 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ASCL5Q7RTU5 278 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 MRPL10Q7Z7H8 261 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 GPR149Q86SP6 731 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ZBTB33Q86T24 672 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 ZNF410Q86VK4 478 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 VSTM4Q8IW00 320 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 SYT2Q8N9I0 419 aaPredicted RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 EEF2KMTQ96G04 330 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 REEP2Q9BRK0 252 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 LXNQ9BS40 222 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 GTPBP4Q9BZE4 634 aaKnown RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 VPS16Q9H269 839 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 DZANK1Q9NVP4 752 aa10.89□□□□□ -0.67
TPM3-210ENST00000368530 SUCLA2Q9P2R7 463 aaPredicted RBP10.89□□□□□ -0.67
TPM3-210ENST00000368530 BICDL2A1A5D9 508 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 TEX33O43247 280 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 EFEMP2O95967 443 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 NPR3P17342 541 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 PPP1R2P41236 205 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 NBL1P41271 181 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 EHHADHQ08426 723 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 GOLGA8FQ08AF8 430 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 GOLGA8DPQ0D2H9 430 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 PSMD2Q13200 908 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 FILIP1LQ4L180 1135 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 TCP11X2Q5H9J9 407 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 UBXN11Q5T124 520 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 TWF2Q6IBS0 349 aaKnown RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 GLB1LQ6UWU2 654 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 APTXQ7Z2E3 356 aaKnown RBP10.88□□□□□ -0.67
TPM3-210ENST00000368530 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
TPM3-210ENST00000368530 CSGALNACT2Q8N6G5 542 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms