RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 WIPI1Q5MNZ9 446 aaPredicted RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 MCTP2Q6DN12 878 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 CXCL17Q6UXB2 119 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 NFXL1Q6ZNB6 911 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 KRBA2Q6ZNG9 492 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 EP400NLQ6ZTU2 488 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 C12orf40Q86WS4 652 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 CERS3Q8IU89 383 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 FAM20CQ8IXL6 584 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ABRAQ8N0Z2 381 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ARMC10Q8N2F6 343 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 AOPEPQ8N6M6 819 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 SHCBP1Q8NEM2 672 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 WDR66Q8TBY9 1149 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ESR2Q92731 530 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 PLPPR2Q96GM1 343 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 MSLNLQ96KJ4 702 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 CTAGE1Q96RT6 745 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 MAP3K14Q99558 947 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 NAA15Q9BXJ9 866 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 L2HGDHQ9H9P8 463 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 LY9Q9HBG7 655 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 BRMS1Q9HCU9 246 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 SSU72Q9NP77 194 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 DISC1Q9NRI5 854 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 TPSG1Q9NRR2 321 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 TRMT13Q9NUP7 481 aaKnown RBP7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ADAMTS1Q9UHI8 967 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 PCOLCE2Q9UKZ9 415 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 KCNH3Q9ULD8 1083 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 PCDHGB7Q9Y5F8 929 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 CLIC4Q9Y696 253 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ATG2AQ2TAZ0 1938 aa7.22□□□□□ -1.25
ECHDC1-202ENST00000368289 ARHGAP6O43182 974 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 PI15O43692 258 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 STX10O60499 249 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 KIF20AO95235 890 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 TUBBP07437 444 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ASNSP08243 561 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 FGRP09769 529 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 MAP4P27816 1152 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 BTDP43251 543 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 UBASH3AP57075 661 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 HAND2P61296 217 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 RACK1P63244 317 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 AKAP17AQ02040 695 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 GABPB1Q06547 395 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 SMAD4Q13485 552 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ITGA7Q13683 1181 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 DOC2BQ14184 412 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 INPP5AQ14642 412 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 NCAPHQ15003 741 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 TMEM63BQ5T3F8 832 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 LRFN4Q6PJG9 635 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 PAOXQ6QHF9 649 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 CYFIP1Q7L576 1253 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 CCDC144CPQ8IYA2 1237 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 CNNM3Q8NE01 707 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ZNF397Q8NF99 534 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ZNF507Q8TCN5 953 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 EZH1Q92800 747 aaPredicted RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 NKD1Q969G9 470 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 FGD4Q96M96 766 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 FAM83CQ9BQN1 747 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 LRRC3Q9BY71 257 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 KATNBL1Q9H079 304 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 TMX1Q9H3N1 280 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 CLEC1BQ9P126 229 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ZSWIM5Q9P217 1185 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 STOML1Q9UBI4 398 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ZBTB21Q9ULJ3 1066 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 FAM50BQ9Y247 325 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 SRPRBQ9Y5M8 271 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 RELNP78509 3460 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 ZNFX1Q9P2E3 1918 aaKnown RBP7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 MYH2Q9UKX2 1941 aa7.21□□□□□ -1.26
ECHDC1-202ENST00000368289 NBPF19A0A087WUL8 3843 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 SIP14410 1827 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 GPR75-ASB3A0A0A6YYF3 556 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 FAM95CA0A1B0GW59 222 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 B4E1Z4 1266 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 KIF28PB7ZC32 967 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 GFRA2O00451 464 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 PRPF3O43395 683 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 DDAH1O94760 285 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 GJB5O95377 273 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 SERPINC1P01008 464 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 LMNAP02545 664 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 PROCP04070 461 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 MYL1P05976 194 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 PFKMP08237 780 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 ETF1P62495 437 aaKnown RBP7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 RING1Q06587 406 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 LRMPQ12912 555 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 PTPN21Q16825 1174 aa7.2□□□□□ -1.26
ECHDC1-202ENST00000368289 DPCR1Q3MIW9 517 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms