RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TMEM110-MUSTN1A8MSY1 372 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 CTNNA2P26232 953 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 DSG3P32926 999 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 FSTL1Q12841 308 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 CYP1B1Q16678 543 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 FAM133BQ5BKY9 247 aaKnown RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 UBAP2Q5T6F2 1119 aaKnown RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 DENND2CQ68D51 928 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ZSWIM2Q8NEG5 633 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 AGAP11Q8TF27 550 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 C18orf8Q96DM3 657 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ATG4CQ96DT6 458 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 THOC1Q96FV9 657 aaKnown RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 MS4A4AQ96JQ5 239 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 TEKT3Q9BXF9 490 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ST6GALNAC4Q9H4F1 302 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 SLC24A3Q9HC58 644 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 UBE2TQ9NPD8 197 aaPredicted RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.111e-8■■■■■ 226.9
PRKN-204ENST00000366896 PKD2L1Q9P0L9 805 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 AGTPBP1Q9UPW5 1226 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 L3MBTL1Q9Y468 752 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ARHGEF35A5YM69 484 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 K7ENM7 598 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 AGTP01019 485 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 PTGIRP43119 386 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 GPC5P78333 572 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 IRX1P78414 480 aaPredicted RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 PPP3CAQ08209 521 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 EPC2Q52LR7 807 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 GPAT2Q6NUI2 795 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ZDHHC24Q6UX98 284 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 PRMT1Q99873 361 aaKnown RBP15.73■□□□□ 0.11
PRKN-204ENST00000366896 AZI2Q9H6S1 392 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 SLC38A10Q9HBR0 1119 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ABCF3Q9NUQ8 709 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 ADAMTS5Q9UNA0 930 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 TRPC6Q9Y210 931 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 SNX24Q9Y343 169 aa15.73■□□□□ 0.11
PRKN-204ENST00000366896 RGS16O15492 202 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 ALAS1P13196 640 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 NQO1P15559 274 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 GTF2A2P52657 109 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 IFI35P80217 286 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 GRIK3Q13003 919 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 ZKSCAN8Q15776 578 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 KAT5Q92993 513 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 ZSWIM1Q9BR11 485 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 NSRP1Q9H0G5 558 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 WNT8AQ9H1J5 351 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 NOP53Q9NZM5 478 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 LARSQ9P2J5 1176 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 MYPNQ86TC9 1320 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 COL11A1P12107 1806 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 MYH11P35749 1972 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 VWA5AO00534 786 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 FTLP02792 175 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 ZNF157P51786 506 aaPredicted RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 NCALDP61601 193 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 C6orf118Q5T5N4 469 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 RGMBQ6NW40 437 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 BZW1Q7L1Q6 419 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 CPNE8Q86YQ8 564 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 ZDHHC14Q8IZN3 488 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 CTTNBP2NLQ9P2B4 639 aa15.72■□□□□ 0.11
PRKN-204ENST00000366896 DBR1Q9UK59 544 aaKnown RBP15.72■□□□□ 0.11
PRKN-204ENST00000366896 TLDC2A0PJX2 215 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 TMEM88BA6NKF7 163 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 SPDYE16A6NNV3 312 aaPredicted RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 IPO5O00410 1097 aaKnown RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 ATMINO43313 823 aaPredicted RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 OAS1P00973 400 aaKnown RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 VIMP08670 466 aaKnown RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 FDX1P10109 184 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 RARAP10276 462 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 CETPP11597 493 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 GCLMP48507 274 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PEX5P50542 639 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PLTPP55058 493 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 ADCY2Q08462 1091 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 SF3A3Q12874 501 aaKnown RBP eCLIP15.71■□□□□ 0.11
PRKN-204ENST00000366896 NAIF1Q69YI7 327 aaPredicted RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 RPUSD2Q8IZ73 545 aaKnown RBP15.71■□□□□ 0.11
PRKN-204ENST00000366896 FBXO25Q8TCJ0 367 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 CD101Q93033 1021 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 CBWD1Q9BRT8 395 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 TIPINQ9BVW5 301 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 HOXC10Q9NYD6 342 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 GRHL1Q9NZI5 618 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 PCDHA3Q9Y5H8 950 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 A0A0G2JMZ2 1700 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 SNX3O60493 162 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 UBOX5O94941 541 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 VAMP7P51809 220 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 KCNJ2P63252 427 aa15.71■□□□□ 0.11
PRKN-204ENST00000366896 SLC29A2Q14542 456 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms