RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 NEU2Q9Y3R4 380 aa12.47□□□□□ -0.41
CDC42BPA-202ENST00000366764 MGEA5O60502 916 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 KLK7P49862 253 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 DNAJC9Q8WXX5 260 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 ERP27Q96DN0 273 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 OSBPL8Q9BZF1 889 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 MAFGO15525 162 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 YWHABP31946 246 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 BFARQ9NZS9 450 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 AGO2Q9UKV8 859 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 PCDHGC5Q9Y5F6 944 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 E7ENQ6 273 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 SH3BP5O60239 455 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 KLHL2O95198 593 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 COMTP21964 271 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 COILP38432 576 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 HIC1Q14526 733 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 PDCD2Q16342 344 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 RSBN1LQ6PCB5 846 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 PPP1R2P1Q96PQ5 205 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 MLXIPLQ9NP71 852 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 DIAPH2O60879 1101 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 PROCA1Q8NCQ7 364 aaPredicted RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 NGRNQ9NPE2 291 aaKnown RBP12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 STAP1Q9ULZ2 295 aa12.46□□□□□ -0.41
CDC42BPA-202ENST00000366764 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 KRT10P13645 584 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 POLR3FQ9H1D9 316 aaPredicted RBP12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 HNRNPH3P31942 346 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 SEC24CP53992 1094 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM161BQ96MY7 647 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 OR6B2Q6IFH4 312 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 SETD3Q86TU7 594 aaPredicted RBP12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 PSPC1Q8WXF1 523 aaKnown RBP12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 CENPTQ96BT3 561 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM213AQ9BRX8 229 aa12.46□□□□□ -0.42
CDC42BPA-202ENST00000366764 TTC1Q99614 292 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 TOPORSQ9NS56 1045 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 BTNL10A8MVZ5 291 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 PKN1Q16512 942 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 ANKEF1Q9NU02 776 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 SUFUQ9UMX1 484 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 NOD1Q9Y239 953 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 DAGLAQ9Y4D2 1042 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 CREG2Q8IUH2 290 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 SMYD2Q9NRG4 433 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 TTC7AQ9ULT0 858 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 AKT3Q9Y243 479 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 SCN11AQ9UI33 1791 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 MYO9BQ13459 2157 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 HEATR6Q6AI08 1181 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 SAMD3Q8N6K7 520 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 PPM1NQ8N819 430 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 DBNDD1Q9H9R9 158 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 CYP26A1O43174 497 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 RNF25Q96BH1 459 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 PGM2Q96G03 612 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 NOP14P78316 857 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 TAB3Q8N5C8 712 aaPredicted RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 KRT35Q92764 455 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 ARL8AQ96BM9 186 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 KCNK16Q96T55 309 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 MAGEB5Q9BZ81 275 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 MAGEA4P43358 317 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 SLC12A6Q9UHW9 1150 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 F8VZ95 297 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 GRB10Q13322 594 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 COBLL1Q53SF7 1204 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 C1orf131Q8NDD1 294 aaKnown RBP12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 ARHGEF26Q96DR7 871 aa12.45□□□□□ -0.42
CDC42BPA-202ENST00000366764 FAM170AA1A519 330 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 ATXN2LQ8WWM7 1075 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 RSAD1Q9HA92 442 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 NDUFA13Q9P0J0 144 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 APOL1O14791 398 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 NQO1P15559 274 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 AGPAT3Q9NRZ7 376 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 SLC9A1P19634 815 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 CNGA3Q16281 694 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 KCNV1Q6PIU1 500 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 SPATA20Q8TB22 786 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 HSPH1Q92598 858 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 ARHGAP20Q9P2F6 1191 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 CDY2AQ9Y6F7 541 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 CDY1Q9Y6F8 540 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 CNTRLQ7Z7A1 2325 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 NFAT5O94916 1531 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 SAT1P21673 171 aa12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 NMT1P30419 496 aaKnown RBP12.44□□□□□ -0.42
CDC42BPA-202ENST00000366764 LRRC14Q15048 493 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms