RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 MANFP55145 182 aaKnown RBP3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 DSG1Q02413 1049 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 ZNF460Q14592 562 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 UBXN2BQ14CS0 331 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 PTPRRQ15256 657 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 MTX3Q5HYI7 312 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 KAZNQ674X7 775 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 FAM180AQ6UWF9 173 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 OR7D4Q8NG98 312 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 CPNE5Q9HCH3 593 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 IL17RBQ9NRM6 502 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 MOCS1Q9NZB8 636 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 CDY2AQ9Y6F7 541 aa3.31□□□□□ -1.88
RNU6-238P-201ENST00000363313 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 MANSC4A6NHS7 340 aaPredicted RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 LINC01548A6NM66 108 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 YY2O15391 372 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 CKBP12277 381 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 CCT4P50991 539 aaKnown RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 KPNA1P52294 538 aaPredicted RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 MST1LQ2TV78 715 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 MORN5Q5VZ52 161 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 OTUD7BQ6GQQ9 843 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 VWA1Q6PCB0 445 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 SYNPOQ8N3V7 929 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 PHACTR3Q96KR7 559 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 ZNF48Q96MX3 618 aaPredicted RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 SRPK1Q96SB4 655 aaKnown RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 PNKPQ96T60 521 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 WACQ9BTA9 647 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 BHMT2Q9H2M3 363 aa3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 MTO1Q9Y2Z2 717 aaKnown RBP3.3□□□□□ -1.88
RNU6-238P-201ENST00000363313 TP73O15350 636 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 INSIG1O15503 277 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 TEX33O43247 280 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 PRR35P0CG20 571 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 KELP23276 732 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 CERS1P27544 350 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 PTPN7P35236 360 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 SCNN1BP51168 640 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 GRM1Q13255 1194 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 TERF2Q15554 542 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 PITRM1Q5JRX3 1037 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 SLC9A4Q6AI14 798 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 VGLL2Q8N8G2 317 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 SSH3Q8TE77 659 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 NUP133Q8WUM0 1156 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 DDB2Q92466 427 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 RGMAQ96B86 450 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 PGBD1Q96JS3 809 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 ZSWIM1Q9BR11 485 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 TMEM79Q9BSE2 394 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 MRI1Q9BV20 369 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 ANO3Q9BYT9 981 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 H2AFY2Q9P0M6 372 aaPredicted RBP3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 TBC1D30Q9Y2I9 924 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 NEU2Q9Y3R4 380 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 PPP2R3BQ9Y5P8 575 aa3.29□□□□□ -1.88
RNU6-238P-201ENST00000363313 ZNF521Q96K83 1311 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 TRGV11A0A075B6L2 103 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 LATS1O95835 1130 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 HSD11B2P80365 405 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 FHL1Q13642 323 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 RAPGEF1Q13905 1077 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 SLC44A4Q53GD3 710 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 SUMO4Q6EEV6 95 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 TRMT2AQ8IZ69 625 aaKnown RBP3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 GPR156Q8NFN8 814 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 CHTF18Q8WVB6 975 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 CASKIN2Q8WXE0 1202 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 TANGO6Q9C0B7 1094 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 NRIP3Q9NQ35 241 aa3.28□□□□□ -1.88
RNU6-238P-201ENST00000363313 A0A1W2PS29 197 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 NTN1O95631 604 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 ALAS1P13196 640 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 ATP5JP18859 108 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 SDSP20132 328 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 TKTP29401 623 aaKnown RBP3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 MAPK10P53779 464 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 TRIM25Q14258 630 aaKnown RBP3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 NEK8Q86SG6 692 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 LILRB2Q8N423 598 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 Q8NA96 180 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 DENND1AQ8TEH3 1009 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 INTS13Q9NVM9 706 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 ZNF580Q9UK33 172 aa3.27□□□□□ -1.89
RNU6-238P-201ENST00000363313 H3BNC9 293 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 LSSP48449 732 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 FAM153CQ494X1 144 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 TSTD2Q5T7W7 516 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 AFMIDQ63HM1 303 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 SEM1Q6ZVN7 128 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 PEG10Q86TG7 708 aaKnown RBP3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 RASSF3Q86WH2 238 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 SMC1BQ8NDV3 1235 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 RAX2Q96IS3 184 aa3.26□□□□□ -1.89
RNU6-238P-201ENST00000363313 IGSF5Q9NSI5 407 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms