RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 FMNL3Q8IVF7 1028 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 SPATA4Q8NEY3 305 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 PNKPQ96T60 521 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 VTA1Q9NP79 307 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 GTF2H1P32780 548 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 WNT7BP56706 349 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 CRHR2Q13324 411 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 MAP9Q49MG5 647 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 SEL1L2Q5TEA6 688 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 MMS22LQ6ZRQ5 1243 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 UBL4BQ8N7F7 174 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 OR6B3Q8NGW1 331 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 ACAP3Q96P50 834 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
HPS1-204ENST00000361490 RBM12Q9NTZ6 932 aaKnown RBP12.45□□□□□ -0.42
HPS1-204ENST00000361490 POLIQ9UNA4 740 aa12.45□□□□□ -0.42
HPS1-204ENST00000361490 PDGFRBP09619 1106 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 GYS2P54840 703 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 SCYL2Q6P3W7 929 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 EXOC8Q8IYI6 725 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 ACSF2Q96CM8 615 aaPredicted RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 ZCCHC17Q9NP64 241 aaKnown RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 GRID2IPA4D2P6 1211 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 HEXIM1O94992 359 aaKnown RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 SCP2P22307 547 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 GTF2F1P35269 517 aaKnown RBP eCLIP12.44□□□□□ -0.42
HPS1-204ENST00000361490 ARL2P36404 184 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 ARHGAP1Q07960 439 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 TRIP13Q15645 432 aaPredicted RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 CDO1Q16878 200 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 MPZL3Q6UWV2 235 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 GSTA5Q7RTV2 222 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 ANKRD23Q86SG2 305 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 SLC9A9Q8IVB4 645 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 CCDC105Q8IYK2 499 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 SYN2Q92777 582 aaPredicted RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 HAUS1Q96CS2 278 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 ARHGAP39Q9C0H5 1083 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 ACBD3Q9H3P7 528 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 SNTG2Q9NY99 539 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 MAGEB2O15479 319 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 AOC2O75106 756 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 GRAP2O75791 330 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 CSPG5O95196 566 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 MAP2K5Q13163 448 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 PAN2Q504Q3 1202 aaKnown RBP12.44□□□□□ -0.42
HPS1-204ENST00000361490 CYP4A22Q5TCH4 519 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 HDAC7Q8WUI4 952 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 RFFLQ8WZ73 363 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 TLR10Q9BXR5 811 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 RABEP2Q9H5N1 569 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 FAM49BQ9NUQ9 324 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 NUB1Q9Y5A7 615 aa12.44□□□□□ -0.42
HPS1-204ENST00000361490 GTPBP10A4D1E9 387 aaKnown RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 RGS2P41220 211 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 FLT3LGP49771 235 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 CDK17Q00537 523 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 AADACL2Q6P093 401 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 RNF10Q8N5U6 811 aaKnown RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 GTF3C2Q8WUA4 911 aaPredicted RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 ZNF516Q92618 1163 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 HVCN1Q96D96 273 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 PRMT7Q9NVM4 692 aaPredicted RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 RGS7P49802 495 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 DYNLT1P63172 113 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 CUL2Q13617 745 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 UBA3Q8TBC4 463 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 ALG6Q9Y672 507 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 PI4K2BG5E9Z4 385 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 ACKR2O00590 384 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 KIF4AO95239 1232 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 EDN1P05305 212 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 NFICP08651 508 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 HNRNPH3P31942 346 aaKnown RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 BPIFB4P59827 614 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 PPP1R7Q15435 360 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 MFSD14CQ5VZR4 134 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 RNF25Q96BH1 459 aaPredicted RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 ACO2Q99798 780 aaKnown RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 NIFKQ9BYG3 293 aaKnown RBP12.43□□□□□ -0.42
HPS1-204ENST00000361490 CCDC113Q9H0I3 377 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
HPS1-204ENST00000361490 ANO9A1A5B4 782 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 LACTBL1A8MY62 500 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 SOCS7O14512 581 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 TLR3O15455 904 aaKnown RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 ARF4P18085 180 aaPredicted RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 RRM1P23921 792 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 MAPK8IP2Q13387 824 aaPredicted RBP12.42□□□□□ -0.42
HPS1-204ENST00000361490 TUBB2AQ13885 445 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
HPS1-204ENST00000361490 ZNF484Q5JVG2 852 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms