RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 KLC3Q6P597 504 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 RXRBP28702 533 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 GEMIN4P57678 1058 aaKnown RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 TBCCQ15814 346 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 QRICH1Q2TAL8 776 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 TRIM67Q6ZTA4 783 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 NLRP9Q7RTR0 991 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 CPA5Q8WXQ8 436 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 FAM84BQ96KN1 310 aaPredicted RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 SRRM3A6NNA2 597 aaPredicted RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 SSTR3P32745 418 aaPredicted RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 EFTUD2Q15029 972 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMC5-201ENST00000361138 XPO7Q9UIA9 1087 aaKnown RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 PPLO60437 1756 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 FAM237AA0A1B0GTK4 181 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 DENND3A2RUS2 1198 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 KLHL2O95198 593 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 BAG6P46379 1132 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 STX3Q13277 289 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 TRIP10Q15642 601 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 WARS2Q9UGM6 360 aaKnown RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 A0A087X0B3 334 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 ATP9AO75110 1047 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 PSMC1P62191 440 aaKnown RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 ZNF200P98182 395 aaPredicted RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 ATXN2LQ8WWM7 1075 aaKnown RBP14.73□□□□□ -0.05
SMC5-201ENST00000361138 MAD2L2Q9UI95 211 aa14.73□□□□□ -0.05
SMC5-201ENST00000361138 EIF3DO15371 548 aaKnown RBP eCLIP14.72□□□□□ -0.05
SMC5-201ENST00000361138 ERVK-9P63128 1117 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 ZCWPW2Q504Y3 356 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 WASHC2DQ5SRD0 308 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 POTEAQ6S8J7 498 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 TMEM179Q6ZVK1 233 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 PRPF31Q8WWY3 499 aaKnown RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 FAM118BQ9BPY3 351 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 ING2Q9H160 280 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 KRT82Q9NSB4 513 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 RHBDL2Q9NX52 303 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 GTSE1Q9NYZ3 720 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 PCSK1NQ9UHG2 260 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 L3MBTL1Q9Y468 752 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 ARHGEF28Q8N1W1 1705 aaKnown RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 E7ENQ6 273 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 GPD1LQ8N335 351 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 TLR10Q9BXR5 811 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 HSPBP1Q9NZL4 362 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 MARCOQ9UEW3 520 aaPredicted RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 PJA2O43164 708 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 CYP19A1P11511 503 aaPredicted RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 EIF3EP60228 445 aaKnown RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 FAM160B2Q86V87 743 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 SENP7Q9BQF6 1050 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 CD163L1Q9NR16 1453 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 RNF103-CHMP3A0A140T963 221 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 CPA2P48052 419 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 TMEM259Q4ZIN3 620 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 PPP6R3Q5H9R7 873 aaPredicted RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 KCNK16Q96T55 309 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 PFDN6O15212 129 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 P4HBP07237 508 aaKnown RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 MYBL2P10244 700 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 DDR1Q08345 913 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 TTC39BQ5VTQ0 682 aaPredicted RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 C16orf89Q6UX73 402 aa14.72□□□□□ -0.05
SMC5-201ENST00000361138 CDC42EP4Q9H3Q1 356 aaKnown RBP14.72□□□□□ -0.05
SMC5-201ENST00000361138 K7ERI5 159 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 S100BP04271 92 aaPredicted RBP14.71□□□□□ -0.05
SMC5-201ENST00000361138 SMARCA1P28370 1054 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 PTPN4P29074 926 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 LARGE2Q8N3Y3 721 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 TBC1D23Q9NUY8 699 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 HEY2Q9UBP5 337 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 MCM8Q9UJA3 840 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 PDE2AO00408 941 aaPredicted RBP14.71□□□□□ -0.05
SMC5-201ENST00000361138 RIPK2O43353 540 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 KDM1AO60341 852 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 PTENP60484 403 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
SMC5-201ENST00000361138 OSTNP61366 133 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 MTMR1Q13613 665 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 SPDYCQ5MJ68 293 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 C3orf62Q6ZUJ4 267 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 ZNF571Q7Z3V5 609 aaPredicted RBP14.71□□□□□ -0.05
SMC5-201ENST00000361138 ZNF507Q8TCN5 953 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 ETAA1Q9NY74 926 aa14.71□□□□□ -0.05
SMC5-201ENST00000361138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.71□□□□□ -0.05
SMC5-201ENST00000361138 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.06
SMC5-201ENST00000361138 PPIP5K2O43314 1243 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 INPP1P49441 399 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 OVGP1Q12889 678 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 MORF4L2Q15014 288 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 C1orf228Q6PIY5 440 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 CLEC4GQ6UXB4 293 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 MIGA2Q7L4E1 593 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 FAM149B1Q96BN6 582 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 THAP11Q96EK4 314 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 HIC2Q96JB3 615 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 NGRNQ9NPE2 291 aaKnown RBP14.71□□□□□ -0.06
SMC5-201ENST00000361138 RGL1Q9NZL6 768 aa14.71□□□□□ -0.06
SMC5-201ENST00000361138 ZHX2Q9Y6X8 837 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms