RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 NAA15Q9BXJ9 866 aaKnown RBP26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 FAM105AQ9NUU6 356 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 APEX2Q9UBZ4 518 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 C2CD2Q9Y426 696 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 HES2Q9Y543 173 aa26.88■■□□□ 1.89
SHARPIN-201ENST00000359551 VNN1O95497 513 aa26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 ZSCAN20P17040 1043 aaPredicted RBP26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 CCZ1BP86790 482 aa26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 CCZ1P86791 482 aaPredicted RBP26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 ZNF397Q8NF99 534 aaPredicted RBP26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 OR8K1Q8NGG5 319 aa26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 PCDHB2Q9Y5E7 798 aa26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.87■■□□□ 1.89
SHARPIN-201ENST00000359551 TULP1O00294 542 aaPredicted RBP26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 MGEA5O60502 916 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 ZC3H11AO75152 810 aaKnown RBP eCLIP26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 LRRN2O75325 713 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 RECQL4O94761 1208 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 RFX1P22670 979 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 YARSP54577 528 aaKnown RBP26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 XKR4Q5GH76 650 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 JADE1Q6IE81 842 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 FAM43BQ6ZT52 329 aaPredicted RBP26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 CACNA2D4Q7Z3S7 1137 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 TMEM139Q8IV31 216 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 CCDC112Q8NEF3 446 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 MTMR12Q9C0I1 747 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 DERAQ9Y315 318 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 FHOD1Q9Y613 1164 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 SCN5AQ14524 2016 aa26.86■■□□□ 1.89
SHARPIN-201ENST00000359551 HLA-DRAP01903 254 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 NFICP08651 508 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 GPNMBQ14956 572 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 PHLDB3Q6NSJ2 640 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TRAPPC11Q7Z392 1133 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 ANKRD36BP1Q96IX9 119 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 CNTN3Q9P232 1028 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 ZNF623O75123 536 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TNNC2P02585 160 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TMEM191BP0C7N4 346 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 HNRNPH3P31942 346 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 RAB27AP51159 221 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TFAMQ00059 246 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 BIRC3Q13489 604 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 IQCEQ6IPM2 695 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 PDXDC1Q6P996 788 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 NECAB2Q7Z6G3 386 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 MRPL10Q7Z7H8 261 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TSPAN18Q96SJ8 248 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 IFIH1Q9BYX4 1025 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 NUCKS1Q9H1E3 243 aaKnown RBP26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 NLRC4Q9NPP4 1024 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 TBX21Q9UL17 535 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 MYO6Q9UM54 1294 aa26.85■■□□□ 1.89
SHARPIN-201ENST00000359551 RNF39Q9H2S5 420 aa26.84■■□□□ 1.89
SHARPIN-201ENST00000359551 HIPK3Q9H422 1215 aa26.84■■□□□ 1.89
SHARPIN-201ENST00000359551 AJAP1Q9UKB5 411 aaPredicted RBP26.84■■□□□ 1.89
SHARPIN-201ENST00000359551 PLAGL2Q9UPG8 496 aa26.84■■□□□ 1.89
SHARPIN-201ENST00000359551 NBNO60934 754 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 AKAP5P24588 427 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 PIK3CAP42336 1068 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 JAM2P57087 298 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 TMEM132DQ14C87 1099 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 GJB7Q6PEY0 223 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 RRAGAQ7L523 313 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 UMODL1Q5DID0 1318 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 TET1Q8NFU7 2136 aa26.83■■□□□ 1.89
SHARPIN-201ENST00000359551 A0A0U1RQF3 1178 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 LRRC53A6NM62 1247 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 PARNO95453 639 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 NCOA4Q13772 614 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ZBTB6Q15916 424 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 MEA1Q16626 185 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 LRRC26Q2I0M4 334 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 HACE1Q8IYU2 909 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 SYN2Q92777 582 aaPredicted RBP26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 BAG1Q99933 345 aaPredicted RBP26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ADAM2Q99965 735 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 APOL6Q9BWW8 343 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 CXCL16Q9H2A7 254 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 DNAJC12Q9UKB3 198 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ATP11BQ9Y2G3 1177 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 KCNE1P15382 129 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 PLEKHG4Q58EX7 1191 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 WDR59Q6PJI9 974 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ARHGEF19Q8IW93 802 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 CXorf38Q8TB03 319 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ZMAT2Q96NC0 199 aaKnown RBP26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 NT5C1BQ96P26 610 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 STK33Q9BYT3 514 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 RGS18Q9NS28 235 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 PARP2Q9UGN5 583 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 ZKSCAN5Q9Y2L8 839 aa26.82■■□□□ 1.88
SHARPIN-201ENST00000359551 NRDCO43847 1150 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 PHACTR2O75167 634 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 SKIP12755 728 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 SKILP12757 684 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 UBE2Q1Q7Z7E8 422 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 C1orf127Q8N9H9 656 aa26.81■■□□□ 1.88
SHARPIN-201ENST00000359551 HELQQ8TDG4 1101 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms