RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 AGR3Q8TD06 166 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 DTX3LQ8TDB6 740 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 CENPKQ9BS16 269 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 DRC3Q9H069 523 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 TSPYL2Q9H2G4 693 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 NPHS2Q9NP85 383 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 AGPAT3Q9NRZ7 376 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 NDE1Q9NXR1 346 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 GTSE1Q9NYZ3 720 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 KCND2Q9NZV8 630 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 APOEP02649 317 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 SARSP49591 514 aaKnown RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 HMGCS2P54868 508 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 CASP7P55210 303 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 SESN2P58004 480 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 POU5F1BQ06416 359 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 NCOA4Q13772 614 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 CAPRIN2Q6IMN6 1127 aaKnown RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 ACAD11Q709F0 780 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 RCOR2Q8IZ40 523 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 MYCBPAPQ8TBZ2 947 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 SLC26A7Q8TE54 656 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 RAB6BQ9NRW1 208 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 CCT8L1PA6NM43 557 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 MED24O75448 989 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 PON1P27169 355 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 PGM1P36871 562 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 PHEXP78562 749 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 XKR3Q5GH77 459 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 ABTB1Q969K4 478 aaPredicted RBP14.5□□□□□ -0.09
VCP-201ENST00000358901 SENP7Q9BQF6 1050 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 FAM96AQ9H5X1 160 aa14.5□□□□□ -0.09
VCP-201ENST00000358901 EIF3DO15371 548 aaKnown RBP eCLIP14.49□□□□□ -0.092e-15■■□□□ 11.6
VCP-201ENST00000358901 STAT5BP51692 787 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 ITGA8P53708 1063 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 HHIPL2Q6UWX4 724 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 TXNRD3Q86VQ6 643 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 DHX38Q92620 1227 aaKnown RBP14.49□□□□□ -0.09
VCP-201ENST00000358901 ATXN7L3BQ96GX2 97 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 MAGEA4P43358 317 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 ACTR2P61160 394 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 TAP1Q03518 808 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 AP1B1Q10567 949 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 KIF19Q2TAC6 998 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 MCEEQ96PE7 176 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 WWP1Q9H0M0 922 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 PABPC3Q9H361 631 aaKnown RBP14.49□□□□□ -0.09
VCP-201ENST00000358901 MARCOQ9UEW3 520 aaPredicted RBP14.49□□□□□ -0.09
VCP-201ENST00000358901 PIK3C2BO00750 1634 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 USP32Q8NFA0 1604 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 A8MXQ7 604 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 FOXP2O15409 715 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 CCDC22O60826 627 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 NR3C2P08235 984 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 FDX1P10109 184 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 CHRNA5P30532 468 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 AP2B1P63010 937 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 MAPK7Q13164 816 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 PID1Q7Z2X4 250 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 DNAAF5Q86Y56 855 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 HAUS8Q9BT25 410 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 RUSC1Q9BVN2 902 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 TIPINQ9BVW5 301 aa14.49□□□□□ -0.09
VCP-201ENST00000358901 XAB2Q9HCS7 855 aaKnown RBP14.49□□□□□ -0.09
VCP-201ENST00000358901 MSH4O15457 936 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 HLA-DRAP01903 254 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 HSPA8P11142 646 aaKnown RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 PDGFRAP16234 1089 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 GPR162Q16538 588 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 TWF2Q6IBS0 349 aaKnown RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 SLC13A5Q86YT5 568 aaPredicted RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 MTMR8Q96EF0 704 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 VCPKMTQ9H867 229 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 ZFATQ9P243 1243 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 KIAA1210Q9ULL0 1709 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 A0A087X0B3 334 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 ADORA2BP29275 332 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 HNRNPH1P31943 449 aaKnown RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 EFNA5P52803 228 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 MORF4L2Q15014 288 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 TMEM259Q4ZIN3 620 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 BEST2Q8NFU1 509 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 RIT2Q99578 217 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 ROPN1BQ9BZX4 212 aaPredicted RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 ROPN1Q9HAT0 212 aaPredicted RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 PIM2Q9P1W9 311 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 POLRMTO00411 1230 aaKnown RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 KCNN4O15554 427 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 SLC26A4O43511 780 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 MGEA5O60502 916 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 GLI1P08151 1106 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 TAC1P20366 129 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 COILP38432 576 aaPredicted RBP14.48□□□□□ -0.09
VCP-201ENST00000358901 AP3M2P53677 418 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 CDK17Q00537 523 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 KDM7AQ6ZMT4 941 aa14.48□□□□□ -0.09
VCP-201ENST00000358901 CDKL3Q8IVW4 592 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms