RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 SLC39A4Q6P5W5 647 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 ABHD15Q6UXT9 468 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 MAATS1Q7Z4T9 603 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 CCDC60Q8IWA6 550 aaPredicted RBP15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 RPUSD2Q8IZ73 545 aaKnown RBP15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 TMC2Q8TDI7 906 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 KAT5Q92993 513 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 NAP1L3Q99457 506 aaPredicted RBP15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 PDLIM7Q9NR12 457 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 FAM153AQ9UHL3 310 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 TELO2Q9Y4R8 837 aa15.36■□□□□ 0.05
NIPAL3-203ENST00000358028 KRIT1O00522 736 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 EIF3HO15372 352 aaKnown RBP eCLIP15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 CYBAP13498 195 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 SP4Q02446 784 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 PRAMEF19Q5SWL8 479 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 KRT39Q6A163 491 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 KDM7AQ6ZMT4 941 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 ZNF467Q7Z7K2 595 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 PARD3BQ8TEW8 1205 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 SEMA4DQ92854 862 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 MFSD14AQ96MC6 490 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 FBXL18Q96ME1 805 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 PLEKHA4Q9H4M7 779 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 ATP6V0A4Q9HBG4 840 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 TMEM8AQ9HCN3 771 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 HMX1Q9NP08 348 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 XPNPEP1Q9NQW7 623 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 CYP26B1Q9NR63 512 aa15.35■□□□□ 0.05
NIPAL3-203ENST00000358028 ADGRA3Q8IWK6 1321 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 ESYT3A0FGR9 886 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 HMGB1P1B2RPK0 211 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 MYO1CO00159 1063 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 DDX3YO15523 660 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SART1O43290 800 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SUPT20HL2P0C7V6 817 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 MFAP3P55082 362 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 IRX5P78411 483 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SLC20A2Q08357 652 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 DNAJC21Q5F1R6 531 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 MAMDC4Q6UXC1 1216 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 ARMCX2Q7L311 632 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 RHOT2Q8IXI1 618 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 PIK3R5Q8WYR1 880 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SEC14L1Q92503 715 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 ARL8AQ96BM9 186 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 CCDC127Q96BQ5 260 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 KREMEN1Q96MU8 473 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 AP1M1Q9BXS5 423 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 COQ4Q9Y3A0 265 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SYNGAP1Q96PV0 1343 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 ZNF233A6NK53 670 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SORBS3O60504 671 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 RTN2O75298 545 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SGPL1O95470 568 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SNAI1O95863 264 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 GARTP22102 1010 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 GTF2H1P32780 548 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 USP8P40818 1118 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 GPC3P51654 580 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 CYP24A1Q07973 514 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 GPD1LQ8N335 351 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 PPM1KQ8N3J5 372 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 POMGNT1Q8WZA1 660 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SHC3Q92529 594 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 DEFB118Q96PH6 123 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 CARD9Q9H257 536 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 RSPH14Q9UHP6 348 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 NOCTQ9UK39 431 aaKnown RBP15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 COG5Q9UP83 839 aa15.34■□□□□ 0.05
NIPAL3-203ENST00000358028 SRRM3A6NNA2 597 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 H0YCG3 227 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 ZEB2O60315 1214 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 FTLP02792 175 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 CHRNB2P17787 502 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 ICAM3P32942 547 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 ALDH5A1P51649 535 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 GUCY2FP51841 1108 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 GNGT1P63211 74 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 ENPEPQ07075 957 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 HLTFQ14527 1009 aaKnown RBP eCLIP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 XKR3Q5GH77 459 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 FOXR1Q6PIV2 292 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 USP37Q86T82 979 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 NOP9Q86U38 636 aaKnown RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 EPS8L1Q8TE68 723 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 NT5C1BQ96P26 610 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 PCDHB18PQ96TA0 734 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 POP1Q99575 1024 aaKnown RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 FAM114A2Q9NRY5 505 aa15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 TOPORSQ9NS56 1045 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 FEZ2Q9UHY8 353 aaPredicted RBP15.33■□□□□ 0.04
NIPAL3-203ENST00000358028 SIP14410 1827 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms