RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 TRIM31Q9BZY9 425 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 DDX47Q9H0S4 455 aaKnown RBP18.92■□□□□ 0.62
NPAS3-202ENST00000356141 HES2Q9Y543 173 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 ZRANB2O95218 330 aaKnown RBP eCLIP18.92■□□□□ 0.62
NPAS3-202ENST00000356141 NOP14P78316 857 aaKnown RBP18.92■□□□□ 0.62
NPAS3-202ENST00000356141 ACVR2BQ13705 512 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 ATF7IP2Q5U623 682 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 TINF2Q9BSI4 451 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 C22orf31O95567 290 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 CDH8P55286 799 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 PSMD6Q15008 389 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 ZACNQ401N2 412 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 TMC2Q8TDI7 906 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 RIN2Q8WYP3 895 aaPredicted RBP18.92■□□□□ 0.62
NPAS3-202ENST00000356141 CYFIP2Q96F07 1278 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 FAM167AQ96KS9 214 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 POLIQ9UNA4 740 aa18.92■□□□□ 0.62
NPAS3-202ENST00000356141 CNTNAP2Q9UHC6 1331 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 GPR25O00155 361 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 LGR5O75473 907 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 CFAP221Q4G0U5 840 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 PARK7Q99497 189 aaKnown RBP18.91■□□□□ 0.62
NPAS3-202ENST00000356141 CDHR5Q9HBB8 845 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 HBP1O60381 514 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 TOM1L1O75674 476 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 BEND6Q5SZJ8 279 aaPredicted RBP18.91■□□□□ 0.62
NPAS3-202ENST00000356141 C8orf74Q6P047 294 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 DDX42Q86XP3 938 aaKnown RBP eCLIP18.91■□□□□ 0.62
NPAS3-202ENST00000356141 EFCAB13Q8IY85 973 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 TXLNBQ8N3L3 684 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 FUT8Q9BYC5 575 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 NENFQ9UMX5 172 aa18.91■□□□□ 0.62
NPAS3-202ENST00000356141 CCDC172P0C7W6 258 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 GUCY2DQ02846 1103 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 PPFIA1Q13136 1202 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 PLPPR4Q7Z2D5 763 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 RFFLQ8WZ73 363 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 C11orf70Q9BRQ4 267 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 C16orf70Q9BSU1 422 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 NUP85Q9BW27 656 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 CELF4Q9BZC1 486 aaKnown RBP18.9■□□□□ 0.62
NPAS3-202ENST00000356141 IFT122Q9HBG6 1241 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 GLI1P08151 1106 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 USP37Q86T82 979 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 NT5DC3Q86UY8 548 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 KIAA0319LQ8IZA0 1049 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 MSANTD4Q8NCY6 345 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 OGFRQ9NZT2 677 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 ADGRA2Q96PE1 1338 aa18.9■□□□□ 0.62
NPAS3-202ENST00000356141 PIK3R2O00459 728 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 THAP12O43422 761 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 NFICP08651 508 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 SSR1P43307 286 aaKnown RBP18.89■□□□□ 0.61
NPAS3-202ENST00000356141 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 DCAF12L1Q5VU92 463 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 SLFN12LQ6IEE8 588 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 ALG3Q92685 438 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 CCDC113Q9H0I3 377 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 DIS3Q9Y2L1 958 aaKnown RBP18.89■□□□□ 0.61
NPAS3-202ENST00000356141 H0YCG3 227 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 P4HA2O15460 535 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 TMEM191BP0C7N4 346 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 MBTD1Q05BQ5 628 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 TUBB2AQ13885 445 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 MXD4Q14582 209 aaPredicted RBP18.89■□□□□ 0.61
NPAS3-202ENST00000356141 GLRA4Q5JXX5 417 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 KCNV1Q6PIU1 500 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 ANKRD23Q86SG2 305 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 ARHGAP39Q9C0H5 1083 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 KATNBL1Q9H079 304 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 CDT1Q9H211 546 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 NOC2LQ9Y3T9 749 aaKnown RBP18.89■□□□□ 0.61
NPAS3-202ENST00000356141 ALG6Q9Y672 507 aa18.89■□□□□ 0.61
NPAS3-202ENST00000356141 FGGP02679 453 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 TMEM253P0C7T8 217 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 TNFAIP2Q03169 654 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 OLFML2BQ68BL8 750 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 TCP11Q8WWU5 503 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 CCDC102AQ96A19 550 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 FAM118BQ9BPY3 351 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 EPB41L5Q9HCM4 733 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 COQ4Q9Y3A0 265 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 CCDC151A5D8V7 595 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 ANKRD62A6NC57 917 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 SNRPFP62306 86 aaKnown RBP18.88■□□□□ 0.61
NPAS3-202ENST00000356141 TRPC3Q13507 836 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 CUL2Q13617 745 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 GRIK4Q16099 956 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 FAM182AQ5T1J6 154 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 KRT222Q8N1A0 295 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 SHCBP1Q8NEM2 672 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 OSMRQ99650 979 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 KLHL11Q9NVR0 708 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 CNOT8Q9UFF9 292 aaKnown RBP18.88■□□□□ 0.61
NPAS3-202ENST00000356141 USTQ9Y2C2 406 aa18.88■□□□□ 0.61
NPAS3-202ENST00000356141 O00370 1275 aa18.87■□□□□ 0.61
NPAS3-202ENST00000356141 COMTP21964 271 aa18.87■□□□□ 0.61
NPAS3-202ENST00000356141 RRM1P23921 792 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms