RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 SCN10AQ9Y5Y9 1956 aa24.59■■□□□ 1.53
SCAMP3-202ENST00000355379 CSDE1O75534 798 aaKnown RBP24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 MOCS3O95396 460 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 TBXAS1P24557 533 aaPredicted RBP24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 HOXD10P28358 340 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 KIZQ2M2Z5 673 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 RUFY4Q6ZNE9 571 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 TRAPPC11Q7Z392 1133 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 APBB1IPQ7Z5R6 666 aaPredicted RBP24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 CDR2LQ86X02 465 aaPredicted RBP24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 GLYCTKQ8IVS8 523 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 CPB2Q96IY4 423 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 FAM84AQ96KN4 292 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 ADPGKQ9BRR6 497 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 PACSIN1Q9BY11 444 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 HDAC6Q9UBN7 1215 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 SALL4Q9UJQ4 1053 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 CAPN6Q9Y6Q1 641 aa24.58■■□□□ 1.53
SCAMP3-202ENST00000355379 A0A0A6YYK5 440 aaPredicted RBP24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 MYADML2A6NDP7 307 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 STAG3L1P0CL83 205 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 RARBP10826 455 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 MAP2K2P36507 400 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 USP8P40818 1118 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 AMPD2Q01433 879 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 CACNB2Q08289 660 aaPredicted RBP24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 NCBP1Q09161 790 aaKnown RBP24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 DCAF4L1Q3SXM0 396 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 C7orf31Q8N865 590 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 CEP120Q8N960 986 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 EPS8L1Q8TE68 723 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 FAM212AQ96EL1 285 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 ANKRD36BP1Q96IX9 119 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 NOCTQ9UK39 431 aaKnown RBP24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 JRKLQ9Y4A0 524 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 RALGAPA2Q2PPJ7 1873 aa24.57■■□□□ 1.52
SCAMP3-202ENST00000355379 CYP26A1O43174 497 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 TREHO43280 583 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 SGPL1O95470 568 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 TNNC2P02585 160 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 DARSP14868 501 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 CAP1Q01518 475 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 CUL2Q13617 745 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 IFI16Q16666 785 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 GNASQ5JWF2 1037 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 DNAJB3Q8WWF6 145 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 IMPG2Q9BZV3 1241 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 ASB7Q9H672 318 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 RNF186Q9NXI6 227 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 ASS1P00966 412 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 TMEM191BP0C7N4 346 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 EFCAB13Q8IY85 973 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 RPUSD2Q8IZ73 545 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 SLC20A1Q8WUM9 679 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 MTMR12Q9C0I1 747 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 APOBEC3GQ9HC16 384 aaKnown RBP24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 SRRDQ9UH36 339 aa24.56■■□□□ 1.52
SCAMP3-202ENST00000355379 TMEM253P0C7T8 217 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 CXCL8P10145 99 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 CHRNB2P17787 502 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 AXLP30530 894 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 BPIFB4P59827 614 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 OSTNP61366 133 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 NOP14P78316 857 aaKnown RBP24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 TRIM32Q13049 653 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 WHAMMP3Q1A5X7 153 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 SGSM1Q2NKQ1 1148 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 NOP9Q86U38 636 aaKnown RBP24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 TMEM192Q8IY95 271 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 CARD6Q9BX69 1037 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 CNTN6Q9UQ52 1028 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 CITO14578 2027 aa24.55■■□□□ 1.52
SCAMP3-202ENST00000355379 ADAMTS4O75173 837 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CST3P01034 146 aaPredicted RBP24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 ATP1A1P05023 1023 aaKnown RBP24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CYP11B1P15538 503 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 GRM5P41594 1212 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 PDE6CP51160 858 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 GALCP54803 685 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 TFAMQ00059 246 aaKnown RBP24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 SPOPLQ6IQ16 392 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 TAF2Q6P1X5 1199 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CATSPER4Q7RTX7 472 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 SLC47A2Q86VL8 602 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 NT5DC4Q86YG4 428 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CD302Q8IX05 232 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CEP112Q8N8E3 955 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 MNS1Q8NEH6 495 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 TAF4BQ92750 862 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 ISCUQ9H1K1 167 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 CDHR5Q9HBB8 845 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 NUB1Q9Y5A7 615 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 PCDHGC5Q9Y5F6 944 aa24.54■■□□□ 1.52
SCAMP3-202ENST00000355379 LACTBL1A8MY62 500 aa24.53■■□□□ 1.52
SCAMP3-202ENST00000355379 GNRH1P01148 92 aa24.53■■□□□ 1.52
SCAMP3-202ENST00000355379 GZMAP12544 262 aa24.53■■□□□ 1.52
SCAMP3-202ENST00000355379 PRLRP16471 622 aa24.53■■□□□ 1.52
SCAMP3-202ENST00000355379 ACO1P21399 889 aaKnown RBP24.53■■□□□ 1.52
SCAMP3-202ENST00000355379 EIF4BP23588 611 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms