RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 TMEM260Q9NX78 707 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 PTTG2Q9NZH5 202 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 HEY2Q9UBP5 337 aa8.35□□□□□ -1.07
CD46-203ENST00000354848 NHSL1Q5SYE7 1610 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 KIAA1551Q9HCM1 1747 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 E9PMD0 336 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 GOLGA8HP0CJ92 632 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 DLATP10515 647 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 TNFAIP3P21580 790 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 RGS2P41220 211 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SLC18A1P54219 525 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 ADARP55265 1226 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 TFAP4Q01664 338 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 DRAP1Q14919 205 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 TRIP13Q15645 432 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 TBC1D9BQ66K14 1250 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 DGKHQ86XP1 1220 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 C4orf33Q8N1A6 199 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 MARCH10Q8NA82 808 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.34□□□□□ -1.072e-8■□□□□ 9.9
CD46-203ENST00000354848 ZNF384Q8TF68 577 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 C1orf54Q8WWF1 131 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SLCO2A1Q92959 643 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 FAM161BQ96MY7 647 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 ORAI2Q96SN7 254 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 POLR3CQ9BUI4 534 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 DCP1AQ9NPI6 582 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 TUBGCP4Q9UGJ1 667 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 A0A0G2JND7 137 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 F8W8V4 182 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 EDIL3O43854 480 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 ZNF862O60290 1169 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 GAS8O95995 478 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 TROVE2P10155 538 aaKnown RBP eCLIP8.34□□□□□ -1.07
CD46-203ENST00000354848 PIM1P11309 404 aaPredicted RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 CA4P22748 312 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 GCAP28676 217 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 PGM1P36871 562 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 RAP1GDS1P52306 607 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 OVGP1Q12889 678 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 NR1H3Q13133 447 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 HNRNPDQ14103 355 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 MESDQ14696 234 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 CHRNA2Q15822 529 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 MAPK6Q16659 721 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 PHLDB2Q86SQ0 1253 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 REXO1Q8N1G1 1221 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 SNRNP27Q8WVK2 155 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 IRGQQ8WZA9 623 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SMC6Q96SB8 1091 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 TTC1Q99614 292 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 EPB41L1Q9H4G0 881 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 PCDH18Q9HCL0 1135 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 TYW1Q9NV66 732 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 NDE1Q9NXR1 346 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 ANKFY1Q9P2R3 1169 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 PAIP2BQ9ULR5 123 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
CD46-203ENST00000354848 TRAF3IP3Q9Y228 551 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 WDR37Q9Y2I8 494 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SH3GLB1Q9Y371 365 aa8.34□□□□□ -1.07
CD46-203ENST00000354848 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.34□□□□□ -1.07
CD46-203ENST00000354848 SUPT3HO75486 399 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 USP1O94782 785 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 RARBP10826 455 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 ESRRAP11474 423 aaPredicted RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 FUT4P22083 530 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CASP4P49662 377 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 TMED1Q13445 227 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 GRM2Q14416 872 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 PKN2Q16513 984 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 CPNE8Q86YQ8 564 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 MAP7D3Q8IWC1 876 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SMYD1Q8NB12 490 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 CD101Q93033 1021 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 DGCR14Q96DF8 476 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 CYTH2Q99418 400 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 TRAIPQ9BWF2 469 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 STK33Q9BYT3 514 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 GPR88Q9GZN0 384 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 WNT8AQ9H1J5 351 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 ZHX3Q9H4I2 956 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 KIAA1586Q9HCI6 787 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 FBXO6Q9NRD1 293 aaPredicted RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 CHORDC1Q9UHD1 332 aaPredicted RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 ANAPC5Q9UJX4 755 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SMG5Q9UPR3 1016 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 C10orf71Q711Q0 1435 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 GTPBP10A4D1E9 387 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 BTBD19C9JJ37 291 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 MAGEB3O15480 346 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 BUD23O43709 281 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 BAG2O95816 211 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 VIL1P09327 827 aaKnown RBP8.33□□□□□ -1.08
CD46-203ENST00000354848 AP2B1P63010 937 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 ITGA9Q13797 1035 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 SGO2Q562F6 1265 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 LVRNQ6Q4G3 990 aa8.33□□□□□ -1.08
CD46-203ENST00000354848 RAPH1Q70E73 1250 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms