RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 DCAF4L1Q3SXM0 396 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 MMEL1Q495T6 779 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 METTL7BQ6UX53 244 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 CDKL3Q8IVW4 592 aaPredicted RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 TTC25Q96NG3 672 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 SKIV2LQ15477 1246 aaKnown RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 EARS2Q5JPH6 523 aaKnown RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 HP1BP3Q5SSJ5 553 aaPredicted RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 KLHDC7AQ5VTJ3 777 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 EXT2Q93063 718 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 RNPC3Q96LT9 517 aaKnown RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 APOL1O14791 398 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 ATXN8OSP0DMR3 200 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 PTPRAP18433 802 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 CA4P22748 312 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 PPARGP37231 505 aaPredicted RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 PPATQ06203 517 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 UBA3Q8TBC4 463 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 IRX2Q9BZI1 471 aaPredicted RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 WDR35Q9P2L0 1181 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 PRG3Q9Y2Y8 225 aaPredicted RBP15.77■□□□□ 0.12
COL17A1-201ENST00000353479 PCDHB2Q9Y5E7 798 aa15.77■□□□□ 0.12
COL17A1-201ENST00000353479 MANSC4A6NHS7 340 aaPredicted RBP15.77■□□□□ 0.11
COL17A1-201ENST00000353479 SUN1O94901 812 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 SLC1A1P43005 524 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 SENP7Q9BQF6 1050 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 FMN2Q9NZ56 1722 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 HMBSP08397 361 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 CD44P16070 742 aaKnown RBP15.77■□□□□ 0.11
COL17A1-201ENST00000353479 GTF2H1P32780 548 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 ADCY2Q08462 1091 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 RBBP5Q15291 538 aaKnown RBP15.77■□□□□ 0.11
COL17A1-201ENST00000353479 C6orf118Q5T5N4 469 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 CBWD2Q8IUF1 395 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 FBXL16Q8N461 479 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 VPS39Q96JC1 886 aa15.77■□□□□ 0.11
COL17A1-201ENST00000353479 P4HA2O15460 535 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 FBXO38Q6PIJ6 1188 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 WDR24Q96S15 920 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 RASSF4Q9H2L5 321 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 KBTBD4Q9NVX7 518 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 NEMP1O14524 444 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 GNL1P36915 607 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-201ENST00000353479 TPI1P60174 286 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 JADE1Q6IE81 842 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 GPAT2Q6NUI2 795 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 MED15Q96RN5 788 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 TMEM117Q9H0C3 514 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 UVRAGQ9P2Y5 699 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 FAM86B1E9PN63 330 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 OGTO15294 1046 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 GYPCP04921 128 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 FAM86B2P0C5J1 330 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 SOX10P56693 466 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 GPATCH11Q8N954 259 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 ANKS1AQ92625 1134 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 EPAS1Q99814 870 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 DPP3Q9NY33 737 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 KRT37O76014 449 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 ZFXP17010 805 aaPredicted RBP15.76■□□□□ 0.11
COL17A1-201ENST00000353479 PCSK1P29120 753 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 SLC12A1Q13621 1099 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 C4orf19Q8IY42 314 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 CBWD1Q9BRT8 395 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 HPSEQ9Y251 543 aa15.76■□□□□ 0.11
COL17A1-201ENST00000353479 PRRG1O14668 218 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 PCK1P35558 622 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CASP4P49662 377 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 TAF6P49848 677 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 RCN2Q14257 317 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 MGAT5BQ3V5L5 792 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CC2D1AQ6P1N0 951 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 TC2NQ8N9U0 490 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CPB2Q96IY4 423 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 ATMINO43313 823 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 BRD2P25440 801 aaKnown RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 ADORA2AP29274 412 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 OAZ1P54368 228 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 PSMC6P62333 389 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 GOLGA7BQ2TAP0 167 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 BAIAP2L1Q9UHR4 511 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 MOSPD1Q9UJG1 213 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 ALDH5A1P51649 535 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CNTN2Q02246 1040 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CAV1Q03135 178 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 AMHR2Q16671 573 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 ITPRIPL1Q6GPH6 555 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 KLC3Q6P597 504 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 MRIQ9BWK5 157 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 TRIM10Q9UDY6 481 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 BCAP29Q9UHQ4 241 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 GPR182O15218 404 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CCT5P48643 541 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CCZ1BP86790 482 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 CCZ1P86791 482 aaPredicted RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 NAB2Q15742 525 aa15.75■□□□□ 0.11
COL17A1-201ENST00000353479 SMAD1Q15797 465 aaKnown RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 ALKBH8Q96BT7 664 aaKnown RBP15.75■□□□□ 0.11
COL17A1-201ENST00000353479 UBQLN1Q9UMX0 589 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms