RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GSC2O15499 205 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 EDF1O60869 148 aaKnown RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 HNRNPCP07910 306 aaKnown RBP eCLIP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 JAM2P57087 298 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 AP1B1Q10567 949 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 STAT4Q14765 748 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 PKN2Q16513 984 aaKnown RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 C12orf60Q5U649 245 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 CCDC174Q6PII3 467 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 OTOAQ7RTW8 1153 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 CLNKQ7Z7G1 428 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 LRRC47Q8N1G4 583 aaKnown RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ARHGAP24Q8N264 748 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 MYCT1Q8N699 235 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF653Q96CK0 615 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 NGLY1Q96IV0 654 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 NSL1Q96IY1 281 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 FAM84BQ96KN1 310 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 FNBP1Q96RU3 617 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 KLF6Q99612 283 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-201ENST00000352993 REEP2Q9BRK0 252 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 SPATA16Q9BXB7 569 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 WNT8AQ9H1J5 351 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 AAASQ9NRG9 546 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 ETNK2Q9NVF9 386 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 WHRNQ9P202 907 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 FRMD4BQ9Y2L6 1034 aa8.11□□□□□ -1.11
BRCA1-201ENST00000352993 FAM13AO94988 1023 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 CHRNB2P17787 502 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 RFC4P35249 363 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 PSMC2P35998 433 aaKnown RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ARFIP2P53365 341 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 MYL7Q01449 175 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 GIT2Q14161 759 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SH2D4BQ5SQS7 431 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 IZUMO3Q5VZ72 239 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SDCCAG8Q86SQ7 713 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 RIBC1Q8N443 379 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 WDR66Q8TBY9 1149 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 RBM15Q96T37 977 aaKnown RBP eCLIP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 NUP85Q9BW27 656 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 INTS2Q9H0H0 1204 aaKnown RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ASCC2Q9H1I8 757 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 BCAS3Q9H6U6 928 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 NDE1Q9NXR1 346 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 CLIC5Q9NZA1 410 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 A6NJR5 290 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 BCRP11274 1271 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 KLRK1P26718 216 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 HOXA7P31268 230 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 FMO5P49326 533 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 PSMC6P62333 389 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 DSG1Q02413 1049 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 MYBPC3Q14896 1274 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 LIN52Q52LA3 116 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 CMPK2Q5EBM0 449 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SLC25A41Q8N5S1 370 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SLC30A5Q8TAD4 765 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF564Q8TBZ8 553 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SH3TC2Q8TF17 1288 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 MPP4Q96JB8 637 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 GJD4Q96KN9 370 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 TRAIPQ9BWF2 469 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 TRIM55Q9BYV6 548 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 FBXO6Q9NRD1 293 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ARMCX1Q9P291 453 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 BTAF1O14981 1849 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 B2RBV5 119 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 PDXKO00764 312 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 MED24O75448 989 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 PIAS1O75925 651 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 HIBADHP31937 336 aaKnown RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 MAGEA4P43358 317 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SLC1A5Q15758 541 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SLC45A4Q5BKX6 768 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SESTD1Q86VW0 696 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SPATA24Q86W54 205 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 RASSF3Q86WH2 238 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 NME8Q8N427 588 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 RFWD2Q8NHY2 731 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 C10orf82Q8WW14 230 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF75CPQ92670 426 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-201ENST00000352993 HAUS1Q96CS2 278 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 OLFM3Q96PB7 478 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ZNF287Q9HBT7 754 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ANKFY1Q9P2R3 1169 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 SERPINA10Q9UK55 444 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ADGRA3Q8IWK6 1321 aa8.1□□□□□ -1.11
BRCA1-201ENST00000352993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-201ENST00000352993 C2orf71A6NGG8 1288 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ARHGAP42A6NI28 874 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 H3BRJ5 948 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 USP1O94782 785 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 ASMTLO95671 621 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 IMPDH2P12268 514 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 AMPD1P23109 780 aa8.09□□□□□ -1.11
BRCA1-201ENST00000352993 MOGSQ13724 837 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms