RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CCL15Q16663 113 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 LIN9Q5TKA1 542 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 C4orf19Q8IY42 314 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF564Q8TBZ8 553 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF214Q9UL59 606 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 DHX15O43143 795 aaKnown RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 TNNC2P02585 160 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 PYGMP11217 842 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 UBA1P22314 1058 aaKnown RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 IFNAR2P48551 515 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 IFRD2Q12894 506 aaPredicted RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ZBTB41Q5SVQ8 909 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 C1orf220Q5T0J3 134 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 CEP120Q8N960 986 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ACTRT1Q8TDG2 376 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 GPRASP2Q96D09 838 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 HES6Q96HZ4 224 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 KREMEN1Q96MU8 473 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 RNF14Q9UBS8 474 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 DDX3YO15523 660 aaKnown RBP11.11□□□□□ -0.63
SMPD4-201ENST00000351288 CYP2B6P20813 491 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ADSSP30520 456 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 GPC5P78333 572 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 GLRA4Q5JXX5 417 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 EFCAB12Q6NXP0 572 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF365Q70YC5 407 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 LMO3Q8TAP4 145 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 MTMR12Q9C0I1 747 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 GGT7Q9UJ14 662 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 RASAL2Q9UJF2 1139 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 PNMA2Q9UL42 364 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
SMPD4-201ENST00000351288 O00370 1275 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CAND2O75155 1236 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 PRKCBP05771 671 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 ALDH5A1P51649 535 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-201ENST00000351288 WHAMMQ8TF30 809 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 FMO2Q99518 471 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 R3HDMLQ9H3Y0 253 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 ZWILCHQ9H900 591 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 KCNK9Q9NPC2 374 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 PARP2Q9UGN5 583 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 TTC7AQ9ULT0 858 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-201ENST00000351288 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 GNA15P30679 374 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SP2Q02086 613 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 QPCTQ16769 361 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 PRAMEF19Q5SWL8 479 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 TTC27Q6P3X3 843 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 ASAP3Q8TDY4 903 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SHOX2O60902 331 aaPredicted RBP11.1□□□□□ -0.63
SMPD4-201ENST00000351288 GRAP2O75791 330 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CFHP08603 1231 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CCNA1P78396 465 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 TTLL4Q14679 1199 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SMAD1Q15797 465 aaKnown RBP11.1□□□□□ -0.63
SMPD4-201ENST00000351288 AMHR2Q16671 573 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SEMA4AQ9H3S1 761 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 ANKEF1Q9NU02 776 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 DMAC2Q9NW81 257 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CPA4Q9UI42 421 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMPD4-201ENST00000351288 CAPN7Q9Y6W3 813 aa11.1□□□□□ -0.63
SMPD4-201ENST00000351288 LRRC37AA6NMS7 1700 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 GREB1LQ9C091 1923 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 CELF2O95319 508 aaKnown RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
SMPD4-201ENST00000351288 FDX1P10109 184 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 SCP2P22307 547 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ADCY8P40145 1251 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF131P52739 623 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 CORO7P57737 925 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ALCAMQ13740 583 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 NCOA4Q13772 614 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 SGO2Q562F6 1265 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 C10orf76Q5T2E6 689 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TMC3Q7Z5M5 1100 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 PLCD3Q8N3E9 789 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TMEM130Q8N3G9 435 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TMEM161BQ8NDZ6 487 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 AFG1LQ8WV93 481 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 CPB2Q96IY4 423 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 PORCNQ9H237 461 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 LRRD1A4D1F6 860 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 PPP1R37O75864 691 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TMEM253P0C7T8 217 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TNFSF9P41273 254 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 WNT7BP56706 349 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 ZNF699Q32M78 642 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 TMEM63BQ5T3F8 832 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 CYP4F22Q6NT55 531 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 JAMLQ86YT9 394 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
SMPD4-201ENST00000351288 PARD3BQ8TEW8 1205 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms