RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SLC6A11P48066 632 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 CLNS1AP54105 237 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 SLC8A3P57103 927 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 GABREP78334 506 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 TMEM62Q0P6H9 643 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 NEXNQ0ZGT2 675 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 SNCBQ16143 134 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 PLEKHN1Q494U1 663 aaPredicted RBP8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 MROH9Q5TGP6 573 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 AP1ARQ63HQ0 302 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 ISM2Q6H9L7 571 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 CEP68Q76N32 757 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 RASGRP2Q7LDG7 609 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 ZNF605Q86T29 641 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 NOP9Q86U38 636 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 IFNL3Q8IZI9 196 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 LINC00301Q8NCQ3 95 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 TSPAN17Q96FV3 270 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 CLIC6Q96NY7 704 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 HSD3B7Q9H2F3 369 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 VCPKMTQ9H867 229 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 MRPL44Q9H9J2 332 aaKnown RBP8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 ATP6V0A4Q9HBG4 840 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 KLC4Q9NSK0 619 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 ASAP1Q9ULH1 1129 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 MYO6Q9UM54 1294 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 MYH13Q9UKX3 1938 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 NEDD4P46934 1319 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 MAP3K15Q6ZN16 1313 aa8.48□□□□□ -1.05
UBE2D3-204ENST00000349311 FAM237AA0A1B0GTK4 181 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 ANKRD18BA2A2Z9 1011 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 GOLGA6BA6NDN3 693 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 NUDT19A8MXV4 375 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 GRM8O00222 908 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 WNT9AO14904 365 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 DTNBO60941 627 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 ANXA1P04083 346 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 NTRK1P04629 796 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 EPB41P11171 864 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 PFKFB1P16118 471 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 GLDCP23378 1020 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 TXKP42681 527 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 SYKP43405 635 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 APBA1Q02410 837 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 ADCY2Q08462 1091 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 GRIK3Q13003 919 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 ALS2CLQ60I27 953 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 SYNE3Q6ZMZ3 975 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 COPS6Q7L5N1 327 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 TMTC1Q8IUR5 882 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 SLC35F6Q8N357 371 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 FSD1Q9BTV5 496 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 MRPL4Q9BYD3 311 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 SPATS2LQ9NUQ6 558 aaKnown RBP8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 TRPC5Q9UL62 973 aaPredicted RBP8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 HCFC2Q9Y5Z7 792 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 AFF2P51816 1311 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 SALL1Q9NSC2 1324 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 UBR3Q6ZT12 1888 aa8.47□□□□□ -1.05
UBE2D3-204ENST00000349311 COL24A1Q17RW2 1714 aa8.46□□□□□ -1.05
UBE2D3-204ENST00000349311 ZC3H12DA2A288 527 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 NDUFAB1O14561 156 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 IGKV5-2P06315 115 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 CYP19A1P11511 503 aaPredicted RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 NEFHP12036 1026 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 AKAP17AQ02040 695 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 GOLGA8FQ08AF8 430 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 GOLGA8DPQ0D2H9 430 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 SLMAPQ14BN4 828 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 CCDC40Q4G0X9 1142 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 FILIP1LQ4L180 1135 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 EMC4Q5J8M3 183 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 HABP4Q5JVS0 413 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 ZC3H14Q6PJT7 736 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 JAZF1Q86VZ6 243 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 TICAM2Q86XR7 235 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 CNGA4Q8IV77 575 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 MLKLQ8NB16 471 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 C3orf20Q8ND61 904 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 ZNF274Q96GC6 653 aaPredicted RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 TMEM169Q96HH4 297 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 FAM227BQ96M60 508 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 TCEANC2Q96MN5 208 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 RUFY1Q96T51 708 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 SH3GL2Q99962 352 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 DESI2Q9BSY9 194 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 NCOA5Q9HCD5 579 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 LZTFL1Q9NQ48 299 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 HOMER3Q9NSC5 361 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 FANCLQ9NW38 375 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 PPARGC1AQ9UBK2 798 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 RGS17Q9UGC6 210 aaPredicted RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 TRAF6Q9Y4K3 522 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 MYO5AQ9Y4I1 1855 aaKnown RBP8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 GRIN2DO15399 1336 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 CARMIL3Q8ND23 1372 aa8.46□□□□□ -1.06
UBE2D3-204ENST00000349311 SPEF2Q9C093 1822 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms