RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 VTI1AQ96AJ9 217 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 WNK4Q96J92 1243 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 ZNF862O60290 1169 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 PLA2G6O60733 806 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 XRCC4Q13426 336 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 RHBDF2Q6PJF5 856 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 MAP4K3Q8IVH8 894 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 MORC4Q8TE76 937 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 TMEM174Q8WUU8 243 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 RMDN3Q96TC7 470 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 SAMD15Q9P1V8 674 aa19.32■□□□□ 0.68
PTP4A3-202ENST00000349124 LYPLA2O95372 231 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 CYP24A1Q07973 514 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 MCOLN2Q8IZK6 566 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 C12orf50Q8NA57 414 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 DYDC1Q8WWB3 177 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 GMLQ99445 158 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 DEFB129Q9H1M3 183 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 RALAP11233 206 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 UNGP13051 313 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 ADCY8P40145 1251 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 DMP1Q13316 513 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 SNCBQ16143 134 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 TBC1D1Q86TI0 1168 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 ANKS4BQ8N8V4 417 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 CNKSR1Q969H4 720 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 CEP170P1Q96L14 293 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 TBC1D22BQ9NU19 505 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 TCEAL9Q9UHQ7 104 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 RIPK3Q9Y572 518 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 MAPK13O15264 365 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 PMM2O15305 246 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 ELF3P78545 371 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 TRPM8Q7Z2W7 1104 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 TCP11Q8WWU5 503 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 MFSD14AQ96MC6 490 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 KLHL11Q9NVR0 708 aa19.31■□□□□ 0.68
PTP4A3-202ENST00000349124 MYPNQ86TC9 1320 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 HNRNPDLO14979 420 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 GBP1P32455 592 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 ATP13A4Q4VNC1 1196 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 CCDC50Q8IVM0 306 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 DDX27Q96GQ7 796 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 C9orf72Q96LT7 481 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 DCLK3Q9C098 648 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 GABBR1Q9UBS5 961 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 SNX3O60493 162 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 TAS2R40P59535 323 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 ZKSCAN8Q15776 578 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 MFSD5Q6N075 450 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 TRMT10CQ7L0Y3 403 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 KIFAP3Q92845 792 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 PDCD2LQ9BRP1 358 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 USTQ9Y2C2 406 aa19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-202ENST00000349124 UBOX5O94941 541 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 TTC4O95801 387 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 ACOT2P49753 483 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 HP1BP3Q5SSJ5 553 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 NIPA1Q7RTP0 329 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 TAS1R3Q7RTX0 852 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 CCDC91Q7Z6B0 441 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 LARGE2Q8N3Y3 721 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 WHRNQ9P202 907 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 EXOC7Q9UPT5 735 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 LOC102724159A0A0B4J2E5 919 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 WDR64B1ANS9 1081 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 ASNSP08243 561 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 CLTAP09496 248 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 GHRP10912 638 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 DSG3P32926 999 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 NF2P35240 595 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 SSR1P43307 286 aaKnown RBP19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 PWP2Q15269 919 aaKnown RBP19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 NUGGCQ68CJ6 796 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 PNMA8AQ86V59 439 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 BICD1Q96G01 975 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 RUNDC3BQ96NL0 473 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 IWS1Q96ST2 819 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 NCAPGQ9BPX3 1015 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 C11orf70Q9BRQ4 267 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 BAIAP2L1Q9UHR4 511 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 ANAPC5Q9UJX4 755 aa19.29■□□□□ 0.68
PTP4A3-202ENST00000349124 DNAJC8O75937 253 aaPredicted RBP19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 CD58P19256 250 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 ITIH2P19823 946 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 SWSAP1Q6NVH7 229 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 TAOK1Q7L7X3 1001 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 MCF2L2Q86YR7 1114 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 TEX2Q8IWB9 1127 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 TBC1D31Q96DN5 1066 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 SNF8Q96H20 258 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 FBXL18Q96ME1 805 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 CCDC134Q9H6E4 229 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 SLC38A10Q9HBR0 1119 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 NINJ2Q9NZG7 142 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 SLC12A4Q9UP95 1085 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 PTPRJQ12913 1337 aa19.28■□□□□ 0.68
PTP4A3-202ENST00000349124 THAP12O43422 761 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms