RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 THAP9Q9H5L6 903 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 TBC1D13Q9NVG8 400 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 INTS13Q9NVM9 706 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 DNAJB4Q9UDY4 337 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 PARP2Q9UGN5 583 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 INPP5FQ9Y2H2 1132 aa13.83□□□□□ -0.2
ERGIC3-202ENST00000348547 KIAA0391O15091 583 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 DDHD2O94830 711 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 POMCP01189 267 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 AMHP03971 560 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 ACTN1P12814 892 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 RPL13P26373 211 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 PSMC2P35998 433 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 DSC1Q08554 894 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 BFSP1Q12934 665 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 KRT31Q15323 416 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 CD300LGQ6UXG3 332 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 BCL7CQ8WUZ0 217 aaPredicted RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 RPF1Q9H9Y2 349 aaKnown RBP13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 SIX4Q9UIU6 781 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 GIT1Q9Y2X7 761 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 SLC4A7Q9Y6M7 1214 aa13.82□□□□□ -0.2
ERGIC3-202ENST00000348547 KCNJ18B7U540 433 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 EFCAB14O75071 495 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 VNN1O95497 513 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 BMP8BP34820 402 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 PBX2P40425 430 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 PBX3P40426 434 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 KCNJ12Q14500 433 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 PTPN21Q16825 1174 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CBWD6Q4V339 395 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 TCP11X2Q5H9J9 407 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 NOMO2Q5JPE7 1267 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CBWD3Q5JTY5 395 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CBWD5Q5RIA9 395 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 TDRD10Q5VZ19 366 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 FRMD5Q7Z6J6 570 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 TMEM173Q86WV6 379 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 C1orf127Q8N9H9 656 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 C3orf58Q8NDZ4 430 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 SP7Q8TDD2 431 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 FAM212AQ96EL1 285 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CGRRF1Q99675 332 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 MTMR12Q9C0I1 747 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 CWH43Q9H720 699 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 KIAA1586Q9HCI6 787 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 ARMCX3Q9UH62 379 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 YBX2Q9Y2T7 364 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 PCDHB7Q9Y5E2 793 aa13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 COL4A4P53420 1690 aaPredicted RBP13.81□□□□□ -0.2
ERGIC3-202ENST00000348547 MYO7AQ13402 2215 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 TBKBP1A7MCY6 615 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 ITGB1P05556 798 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 DLATP10515 647 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 SKIP12755 728 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 KCNJ6P48051 423 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 VAMP7P51809 220 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 POU5F1Q01860 360 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 PPP2R3AQ06190 1150 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 GLB1LQ6UWU2 654 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 FAM43BQ6ZT52 329 aaPredicted RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 SEMA4DQ92854 862 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 NAT10Q9H0A0 1025 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 PLEKHA5Q9HAU0 1116 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 TAB2Q9NYJ8 693 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 LIMA1Q9UHB6 759 aaKnown RBP13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 FRMD4BQ9Y2L6 1034 aa13.8□□□□□ -0.2
ERGIC3-202ENST00000348547 XIRP2A4UGR9 3374 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 C5orf42Q9H799 3197 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 IL18RAPO95256 599 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 EPB41P11171 864 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 GCLMP48507 274 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 APBA1Q02410 837 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 TMEM132DQ14C87 1099 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 KYAT1Q16773 422 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 INTS8Q75QN2 995 aaKnown RBP13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 APBB1IPQ7Z5R6 666 aaPredicted RBP13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 COLGALT2Q8IYK4 626 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 KIF12Q96FN5 646 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 SLC9A7Q96T83 725 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 VN1R3Q9BXE9 311 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 ASB7Q9H672 318 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 NRDE2Q9H7Z3 1164 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 C2CD2Q9Y426 696 aa13.79□□□□□ -0.2
ERGIC3-202ENST00000348547 ANO9A1A5B4 782 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 SPTLC1O15269 473 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 C4BPAP04003 597 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 SLC11A1P49279 550 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 TFAMQ00059 246 aaKnown RBP13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 ZACNQ401N2 412 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms