RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 ZBTB41Q5SVQ8 909 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ALKBH8Q96BT7 664 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MCRS1Q96EZ8 462 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 TET3O43151 1660 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 CPSF1Q10570 1443 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 AKR1B1P15121 316 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 CNGA3Q16281 694 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 QRICH1Q2TAL8 776 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 SCN4BQ8IWT1 228 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 RAD54LQ92698 747 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MRPL40Q9NQ50 206 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 MDM2Q00987 491 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 SLFN12LQ6IEE8 588 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 NYAP1Q6ZVC0 841 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 KIF2BQ8N4N8 673 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 USP15Q9Y4E8 981 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 GSG1L2A8MUP6 293 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 PPIDQ08752 370 aaKnown RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 FOXD4Q12950 439 aaPredicted RBP11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 STK4Q13043 487 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 BBS9Q3SYG4 887 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 FSCBQ5H9T9 825 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 EXT2Q93063 718 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
SMARCE1-202ENST00000348513 RPAP1Q9BWH6 1393 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 WDR64B1ANS9 1081 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 SEMA3DO95025 777 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 UNC13DQ70J99 1090 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 RAB44Q7Z6P3 723 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 TTC30BQ8N4P2 665 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 RBBP8NLQ8NC74 664 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 NSUN6Q8TEA1 469 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 B3GALT6Q96L58 329 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ADCY10Q96PN6 1610 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ATXN2Q99700 1313 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 GOLGA8MH3BSY2 632 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 TDP2O95551 362 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 RECQLP46063 649 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 GRM4Q14833 912 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 MAPK6Q16659 721 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 PLEKHG4BQ96PX9 1271 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 TGS1Q96RS0 853 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 HEMGNQ9BXL5 484 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 OVOS2A0A0G2JMS6 1433 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 OVOS2A0A0J9YW53 1432 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 OVOS2Q6IE36 1432 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 GLI2P10070 1586 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 NDUFB5O43674 189 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 TOM1L1O75674 476 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 NR3C1P04150 777 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 PLIN5Q00G26 463 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 COASYQ13057 564 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 RSBN1Q5VWQ0 802 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 MB21D2Q8IYB1 491 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 MAGEC3Q8TD91 643 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 DEPDC1BQ8WUY9 529 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 GCNAQ96QF7 691 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ORC6Q9Y5N6 252 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 F8VZ95 297 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 COQ9O75208 318 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 HMGCS2P54868 508 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 C21orf59P57076 290 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 SURF1Q15526 300 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ZNF699Q32M78 642 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ALKBH5Q6P6C2 394 aaKnown RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 TMEM270Q6UE05 265 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 NCCRP1Q6ZVX7 275 aaPredicted RBP11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 SPATA33Q96N06 139 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ELP3Q9H9T3 547 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
SMARCE1-202ENST00000348513 DNALI1O14645 258 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CNOT3O75175 753 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CDC25CP30307 473 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 RGS2P41220 211 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PRCPP42785 496 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CRELD2Q6UXH1 353 aaPredicted RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CDC26Q8NHZ8 85 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 RNPC3Q96LT9 517 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 LRCH1Q9Y2L9 728 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 ZBED1O96006 694 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 FRA10AC1Q70Z53 315 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 TRIM15Q9C019 465 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 GINM1Q9NU53 330 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 DDX20Q9UHI6 824 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 TSC22D1Q15714 1073 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 SPOPLQ6IQ16 392 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 APOBEC3FQ8IUX4 373 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 PRMT1Q99873 361 aaKnown RBP11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 L2HGDHQ9H9P8 463 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 GPC3P51654 580 aa11.68□□□□□ -0.54
SMARCE1-202ENST00000348513 CLCN2P51788 898 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms