RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SV2AQ7L0J3 742 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 CRIPAKQ8N1N5 446 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 GAD1Q99259 594 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 ASB7Q9H672 318 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 PLEKHA5Q9HAU0 1116 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 CNTN3Q9P232 1028 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 PLAGL2Q9UPG8 496 aa20.58■□□□□ 0.88
CHMP4A-201ENST00000347519 SKIP12755 728 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 PBX1P40424 430 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 MLH1P40692 756 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 TFAMQ00059 246 aaKnown RBP20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 IKBKEQ14164 716 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 CLLU1OSQ5K130 101 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 TDRD10Q5VZ19 366 aaKnown RBP20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 WDR49Q8IV35 697 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 RPUSD2Q8IZ73 545 aaKnown RBP20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 CRACR2AQ9BSW2 395 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 MTMR12Q9C0I1 747 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 TMEM8AQ9HCN3 771 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 GIT1Q9Y2X7 761 aa20.57■□□□□ 0.88
CHMP4A-201ENST00000347519 SMIM28A0A1B0GU29 152 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 CBFA2T2O43439 604 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 OFD1O75665 1012 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 VNN1O95497 513 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 TPM2P07951 284 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 FGFR1P11362 822 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 KCNE1P15382 129 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 GTF2H1P32780 548 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 GATMP50440 423 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 MYL7Q01449 175 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 FPGSQ05932 587 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 PPIGQ13427 754 aaKnown RBP eCLIP20.56■□□□□ 0.886e-8■■□□□ 12.9
CHMP4A-201ENST00000347519 ZBTB6Q15916 424 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 ZACNQ401N2 412 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 CD302Q8IX05 232 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 HACE1Q8IYU2 909 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 SEMA4DQ92854 862 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 C18orf25Q96B23 403 aaPredicted RBP20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 ELMO3Q96BJ8 720 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 PGBD4Q96DM1 585 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 KIF12Q96FN5 646 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 RSAD1Q9HA92 442 aa20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 TDRD15B5MCY1 1934 aaKnown RBP20.56■□□□□ 0.88
CHMP4A-201ENST00000347519 ARL5CA6NH57 179 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 EOMESO95936 686 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 MXI1P50539 228 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 APBA1Q02410 837 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 TMEM132DQ14C87 1099 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 SYCP1Q15431 976 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 DPY19L2P1Q6NXN4 242 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 ZNF365Q70YC5 407 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 TAS1R2Q8TE23 839 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 MRFAP1L1Q96HT8 127 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 ELAC1Q9H777 363 aaKnown RBP20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 TMEM161AQ9NX61 479 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 TUBGCP4Q9UGJ1 667 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 SIK3Q9Y2K2 1263 aa20.55■□□□□ 0.88
CHMP4A-201ENST00000347519 COL4A6Q14031 1691 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 ABHD14A-ACY1A0A1B0GW23 586 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 STX10O60499 249 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 PFKMP08237 780 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 SLC9A1P19634 815 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 SCNN1GP51170 649 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 DEFB103AP81534 67 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 SOX4Q06945 474 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 DUOXA2Q1HG44 320 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 EPC2Q52LR7 807 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 TMEM240Q5SV17 173 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 FKBP15Q5T1M5 1219 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 KRT39Q6A163 491 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 FAM43BQ6ZT52 329 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 OTOP2Q7RTS6 562 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 TRAPPC11Q7Z392 1133 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 TMCO2Q7Z6W1 182 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 USP37Q86T82 979 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 C1orf127Q8N9H9 656 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 LMO3Q8TAP4 145 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 CXorf38Q8TB03 319 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 HELQQ8TDG4 1101 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 PPP1R10Q96QC0 940 aaKnown RBP20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 ERGIC2Q96RQ1 377 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.888e-7■■■■■ 140.3
CHMP4A-201ENST00000347519 SIX4Q9UIU6 781 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 INPP5FQ9Y2H2 1132 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 DERAQ9Y315 318 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 C2CD2Q9Y426 696 aa20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 FNDC1Q4ZHG4 1894 aaPredicted RBP20.54■□□□□ 0.88
CHMP4A-201ENST00000347519 PMM2O15305 246 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 CST3P01034 146 aaPredicted RBP20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 TMEM191BP0C7N4 346 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 ACTN1P12814 892 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 WDR5P61964 334 aaKnown RBP20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 NAB2Q15742 525 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.53■□□□□ 0.889e-7■■■□□ 14.9
CHMP4A-201ENST00000347519 CACNG4Q9UBN1 327 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 COQ4Q9Y3A0 265 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 PCDHB7Q9Y5E2 793 aa20.53■□□□□ 0.88
CHMP4A-201ENST00000347519 INPPL1O15357 1258 aa20.52■□□□□ 0.88
CHMP4A-201ENST00000347519 POMCP01189 267 aa20.52■□□□□ 0.88
CHMP4A-201ENST00000347519 HLA-DRAP01903 254 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms