RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SHC3Q92529 594 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 KAT5Q92993 513 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 WDR24Q96S15 920 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 IRX2Q9BZI1 471 aaPredicted RBP23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 LACRTQ9GZZ8 138 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 CDHR5Q9HBB8 845 aa23.15■■□□□ 1.3
TSPAN3-202ENST00000346495 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.15■■□□□ 1.36e-6■■■■■ 48.1
TSPAN3-202ENST00000346495 RCCD1A6NED2 376 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 STAG3L1P0CL83 205 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 EIF4BP23588 611 aaKnown RBP23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 PRMT2P55345 433 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 PCSK9Q8NBP7 692 aaKnown RBP23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 TATDN2Q93075 761 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 FAM84AQ96KN4 292 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 PI4K2AQ9BTU6 479 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 TRIM10Q9UDY6 481 aa23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 DDX20Q9UHI6 824 aaKnown RBP23.14■■□□□ 1.29
TSPAN3-202ENST00000346495 FGFR4P22455 802 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 AXLP30530 894 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 CRYBB1P53674 252 aaPredicted RBP23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 HTRA3P83110 453 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 KCNA10Q16322 511 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 FAM71AQ8IYT1 594 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 TFR2Q9UP52 801 aa23.13■■□□□ 1.29
TSPAN3-202ENST00000346495 TNNC2P02585 160 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 ASGR1P07306 291 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 TMEM191BP0C7N4 346 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 CXCL8P10145 99 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 NCOA4Q13772 614 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 SNX17Q15036 470 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 CCSAPQ6IQ19 270 aaPredicted RBP23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 TRAPPC11Q7Z392 1133 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 SESTD1Q86VW0 696 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 ANKRD36BP1Q96IX9 119 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 MTMR12Q9C0I1 747 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 ATP8B3O60423 1300 aa23.12■■□□□ 1.29
TSPAN3-202ENST00000346495 USP8P40818 1118 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 NAB2Q15742 525 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 NOTUMQ6P988 496 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 TMEM192Q8IY95 271 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 SLAIN1Q8ND83 568 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 ZNF296Q8WUU4 475 aaPredicted RBP23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 SYT11Q9BT88 431 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 IMPG2Q9BZV3 1241 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 ASB7Q9H672 318 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 NAGPAQ9UK23 515 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 DDX3XO00571 662 aaKnown RBP eCLIP23.11■■□□□ 1.291e-9■■■■■ 47.1
TSPAN3-202ENST00000346495 RPLP2P05387 115 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 TNFAIP3P21580 790 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 HOXA11P31270 313 aaPredicted RBP23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 GRM5P41594 1212 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 TFAMQ00059 246 aaKnown RBP23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 GDF6Q6KF10 455 aaPredicted RBP23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 SLC27A1Q6PCB7 646 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 RNF180Q86T96 592 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 RSPH3Q86UC2 560 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 EFCAB13Q8IY85 973 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 SLC35F6Q8N357 371 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 NENFQ9UMX5 172 aa23.11■■□□□ 1.29
TSPAN3-202ENST00000346495 LACTBL1A8MY62 500 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 RIOK3O14730 519 aaKnown RBP23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 FANCGO15287 622 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 MYCNP04198 464 aaPredicted RBP23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 TBXAS1P24557 533 aaPredicted RBP23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 FAM47CQ5HY64 1035 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 ALKBH5Q6P6C2 394 aaKnown RBP23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 SLC30A5Q8TAD4 765 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 SECISBP2LQ93073 1101 aaKnown RBP23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 ACAP3Q96P50 834 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 AGPAT1Q99943 283 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 MROH7Q68CQ1 1323 aa23.1■■□□□ 1.29
TSPAN3-202ENST00000346495 M0QZ92 97 aa23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 CABYRO75952 493 aa23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 NPTXRO95502 500 aa23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 NOP14P78316 857 aaKnown RBP23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 TRPC3Q13507 836 aa23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 LNX1Q8TBB1 728 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 CCDC94Q9BW85 323 aaPredicted RBP23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 CELF4Q9BZC1 486 aaKnown RBP23.09■■□□□ 1.29
TSPAN3-202ENST00000346495 ASS1P00966 412 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 MRPS6P82932 125 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 CUL2Q13617 745 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 SGSM1Q2NKQ1 1148 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 SLC10A6Q3KNW5 377 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 SPOPLQ6IQ16 392 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 CD302Q8IX05 232 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 MYRIPQ8NFW9 859 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 U2AF1L4Q8WU68 220 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 TMEM40Q8WWA1 233 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 ELMO3Q96BJ8 720 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 APOBEC3GQ9HC16 384 aaKnown RBP23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 DUSP10Q9Y6W6 482 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 RALGAPA2Q2PPJ7 1873 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 CITO14578 2027 aa23.08■■□□□ 1.29
TSPAN3-202ENST00000346495 MACROD2A1Z1Q3 448 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 CTAGE9A4FU28 777 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 CYP26A1O43174 497 aa23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 URI1O94763 535 aaPredicted RBP23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 CST3P01034 146 aaPredicted RBP23.08■■□□□ 1.28
TSPAN3-202ENST00000346495 INHAP05111 366 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms