RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 IGSF21Q96ID5 467 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CLIC6Q96NY7 704 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 C2orf40Q9H1Z8 148 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 AGPAT5Q9NUQ2 364 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 SSUH2Q9Y2M2 353 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 A0A0A0MRY4 1105 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 WDR64B1ANS9 1081 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 NOP56O00567 594 aaKnown RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 NPC1O15118 1278 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 TXLNAP40222 546 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CLNS1AP54105 237 aaKnown RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 BYSLQ13895 437 aaKnown RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 RAB33AQ14088 237 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 HIC1Q14526 733 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 MXD4Q14582 209 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 DCAF4L1Q3SXM0 396 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 PLA2G2CQ5R387 149 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 GLRX5Q86SX6 157 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 KIAA0319LQ8IZA0 1049 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CEP112Q8N8E3 955 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 MYADMQ96S97 322 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 COLEC11Q9BWP8 271 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CARD6Q9BX69 1037 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 GCOM2Q9BZD3 368 aaPredicted RBP7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CCSER1Q9C0I3 900 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 IMPACTQ9P2X3 320 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 LRFN2Q9ULH4 789 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 ATP6V1DQ9Y5K8 247 aa7.98□□□□□ -1.13
ZNF540-202ENST00000343599 CXorf51AA0A1B0GTR3 108 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 EIF2DP41214 584 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 NEK4P51957 841 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 DHX8Q14562 1220 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 FILIP1LQ4L180 1135 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 TMEM164Q5U3C3 297 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 TRIM65Q6PJ69 517 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 KCNT2Q6UVM3 1135 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 NSMFQ6X4W1 530 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 KIAA1328Q86T90 577 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 SPICE1Q8N0Z3 855 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 OR8K1Q8NGG5 319 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 UBAC1Q9BSL1 405 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 BATF3Q9NR55 127 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PADI3Q9ULW8 664 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PPP1R11O60927 126 aaPredicted RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 ECEL1O95672 775 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 RPL9P32969 192 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 MYBPC2Q14324 1141 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 ZRSR2Q15696 482 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 RAVER1Q8IY67 606 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 EFCAB3Q8N7B9 438 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PLEKHG4BQ96PX9 1271 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 B3GNT4Q9C0J1 378 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 NUP62CLQ9H1M0 184 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 LIMD1Q9UGP4 676 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 SEC63Q9UGP8 760 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 RAB21Q9UL25 225 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 ZMIZ1Q9ULJ6 1067 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 H0YCG3 227 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PES1O00541 588 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 EBAG9O00559 213 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 N4BP1O75113 896 aaKnown RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 TCF7P36402 384 aaPredicted RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PHKA2P46019 1235 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 TRAPPC10P48553 1259 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 CAMK2BQ13554 666 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 SNX1Q13596 522 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 TBC1D10CQ8IV04 446 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 ATOH1Q92858 354 aaPredicted RBP7.97□□□□□ -1.13
ZNF540-202ENST00000343599 SAAL1Q96ER3 474 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 CLDND1Q9NY35 253 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 L1RE1Q9UN81 338 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 PCDHA10Q9Y5I2 948 aa7.97□□□□□ -1.13
ZNF540-202ENST00000343599 NEDD4P46934 1319 aa7.96□□□□□ -1.13
ZNF540-202ENST00000343599 CNTNAP5Q8WYK1 1306 aa7.96□□□□□ -1.13
ZNF540-202ENST00000343599 TCF20Q9UGU0 1960 aaKnown RBP7.96□□□□□ -1.13
ZNF540-202ENST00000343599 ZSCAN9O15535 394 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 SH3BP5O60239 455 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 KCNA5P22460 613 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 GPC3P51654 580 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 STAT5BP51692 787 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 EXOSC10Q01780 885 aaKnown RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 SP2Q02086 613 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 MTMR1Q13613 665 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 MRPL58Q14197 206 aaKnown RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 PFKFB3Q16875 520 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 LY6KQ17RY6 165 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 LETM2Q2VYF4 491 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 METTL3Q86U44 580 aaKnown RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 TMEM105Q8N8V8 129 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 KREMEN2Q8NCW0 462 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 WNT8BQ93098 351 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 ZNF396Q96N95 335 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 RPS6KC1Q96S38 1066 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 NUP88Q99567 741 aaPredicted RBP7.96□□□□□ -1.14
ZNF540-202ENST00000343599 TCEAL9Q9UHQ7 104 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 PTPRDP23468 1912 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 FANCGO15287 622 aa7.96□□□□□ -1.14
ZNF540-202ENST00000343599 ATG13O75143 517 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms