RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 PDE6CP51160 858 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 GYS2P54840 703 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 GCNT1Q02742 428 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 TFDP1Q14186 410 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 MAMDC4Q6UXC1 1216 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 ZNF467Q7Z7K2 595 aaPredicted RBP20■□□□□ 0.79
HOXA9-201ENST00000343483 SYCE1Q8N0S2 351 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 PPTC7Q8NI37 304 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 CGRRF1Q99675 332 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 ACO2Q99798 780 aaKnown RBP20■□□□□ 0.79
HOXA9-201ENST00000343483 RBM12Q9NTZ6 932 aaKnown RBP20■□□□□ 0.79
HOXA9-201ENST00000343483 DMGDHQ9UI17 866 aaKnown RBP20■□□□□ 0.79
HOXA9-201ENST00000343483 PLXNB2O15031 1838 aa20■□□□□ 0.79
HOXA9-201ENST00000343483 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.99■□□□□ 0.79
HOXA9-201ENST00000343483 INO80B-WBP1J3KQ70 363 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 KIF4AO95239 1232 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 MMEP08473 750 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 TNFSF9P41273 254 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 MRPS25P82663 173 aaKnown RBP19.99■□□□□ 0.79
HOXA9-201ENST00000343483 GRB14Q14449 540 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 FAM110CQ1W6H9 321 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 ENOSF1Q7L5Y1 443 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 GDAP1L1Q96MZ0 367 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 PCDHB18PQ96TA0 734 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 SELENOOQ9BVL4 669 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 INO80BQ9C086 356 aaPredicted RBP19.99■□□□□ 0.79
HOXA9-201ENST00000343483 VPS18Q9P253 973 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 CNTNAP2Q9UHC6 1331 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 C22orf31O95567 290 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 INSRRP14616 1297 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 SLC7A5Q01650 507 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 TMEM132AQ24JP5 1023 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 C8orf74Q6P047 294 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 PLEKHH3Q7Z736 793 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 MAML3Q96JK9 1138 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 KATNBL1Q9H079 304 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 HPCAL4Q9UM19 191 aa19.99■□□□□ 0.79
HOXA9-201ENST00000343483 RBM47A0AV96 593 aaKnown RBP19.98■□□□□ 0.79
HOXA9-201ENST00000343483 BUB1BO60566 1050 aaPredicted RBP19.98■□□□□ 0.79
HOXA9-201ENST00000343483 VNN1O95497 513 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 RNASE9P60153 205 aaKnown RBP19.98■□□□□ 0.79
HOXA9-201ENST00000343483 SPOPLQ6IQ16 392 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 SLFN11Q7Z7L1 901 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 OR5B17Q8NGF7 314 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FAM71BQ8TC56 605 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 HHIPL1Q96JK4 782 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 ISCUQ9H1K1 167 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 ERICH4A6NGS2 130 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 PHACTR2O75167 634 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 SLC10A3P09131 477 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FMO1Q01740 532 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 AENQ8WTP8 325 aaKnown RBP19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FAM212AQ96EL1 285 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FAM81BQ96LP2 452 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 MED4Q9NPJ6 270 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 STIM2Q9P246 746 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 ADAM21Q9UKJ8 722 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FAN1Q9Y2M0 1017 aa19.98■□□□□ 0.79
HOXA9-201ENST00000343483 FAM189A1O60320 539 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 RTN2O75298 545 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 MAPK4P31152 587 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 CDR2Q01850 454 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 ZNF484Q5JVG2 852 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 BRSK2Q8IWQ3 736 aa19.97■□□□□ 0.79
HOXA9-201ENST00000343483 EMID1Q96A84 441 aaPredicted RBP19.97■□□□□ 0.79
HOXA9-201ENST00000343483 OGTO15294 1046 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 B4GALT5O43286 388 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 CALCAP01258 141 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 AARSP49588 968 aaKnown RBP eCLIP19.96■□□□□ 0.79
HOXA9-201ENST00000343483 MCL1Q07820 350 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 GLE1Q53GS7 698 aaKnown RBP19.96■□□□□ 0.79
HOXA9-201ENST00000343483 NT5DC3Q86UY8 548 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 PPP1R16BQ96T49 567 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 TINF2Q9BSI4 451 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 CTTNBP2NLQ9P2B4 639 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 COG5Q9UP83 839 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 PLXNA1Q9UIW2 1896 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 ACKR2O00590 384 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 SMPD1P17405 629 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 GPC5P78333 572 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 ZNF568Q3ZCX4 644 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 ATF7IP2Q5U623 682 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 RHOT2Q8IXI1 618 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 EXOC4Q96A65 974 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 MINDY3Q9H8M7 445 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 AMFRQ9UKV5 643 aa19.96■□□□□ 0.79
HOXA9-201ENST00000343483 ABLIM1O14639 778 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 ASAP2O43150 1006 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 GZMAP12544 262 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 PTENP60484 403 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 MBTD1Q05BQ5 628 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 MPZL3Q6UWV2 235 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 TSHZ1Q6ZSZ6 1077 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 CDR2LQ86X02 465 aaPredicted RBP19.95■□□□□ 0.78
HOXA9-201ENST00000343483 C16orf70Q9BSU1 422 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 FZD8Q9H461 694 aa19.95■□□□□ 0.78
HOXA9-201ENST00000343483 APOBEC3GQ9HC16 384 aaKnown RBP19.95■□□□□ 0.78
HOXA9-201ENST00000343483 CHORDC1Q9UHD1 332 aaPredicted RBP19.95■□□□□ 0.78
HOXA9-201ENST00000343483 STXBP5LQ9Y2K9 1186 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms