RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 CDT1Q9H211 546 aa21.51■■□□□ 1.03
RTN1-202ENST00000342503 ANKZF1Q9H8Y5 726 aa21.51■■□□□ 1.03
RTN1-202ENST00000342503 APOBEC3GQ9HC16 384 aaKnown RBP21.51■■□□□ 1.03
RTN1-202ENST00000342503 ANKRD62A6NC57 917 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 DCAF8L1A6NGE4 600 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 CSDE1O75534 798 aaKnown RBP21.5■■□□□ 1.03
RTN1-202ENST00000342503 PDE6CP51160 858 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 FMO1Q01740 532 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 CRHR2Q13324 411 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 TLK2Q86UE8 772 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 LENG1Q96BZ8 264 aaPredicted RBP21.5■■□□□ 1.03
RTN1-202ENST00000342503 RPGRIP1Q96KN7 1286 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 PARD6BQ9BYG5 372 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 THAP2Q9H0W7 228 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 ISCUQ9H1K1 167 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 GJD2Q9UKL4 321 aa21.5■■□□□ 1.03
RTN1-202ENST00000342503 PACSIN2Q9UNF0 486 aaPredicted RBP21.5■■□□□ 1.03
RTN1-202ENST00000342503 ZEB2O60315 1214 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 FTLP02792 175 aaPredicted RBP21.49■■□□□ 1.03
RTN1-202ENST00000342503 CLCN6P51797 869 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 OSTNP61366 133 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 CDR2Q01850 454 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 SREBF2Q12772 1141 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 NCOA4Q13772 614 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 SCARA3Q6AZY7 606 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 CEP120Q8N960 986 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 SLC35G2Q8TBE7 412 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 LMBR1Q8WVP7 490 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 RFFLQ8WZ73 363 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 SETD4Q9NVD3 440 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 RTN2O75298 545 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 CUL2Q13617 745 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 KIAA0319LQ8IZA0 1049 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 NLRP7Q8WX94 980 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 DDX1Q92499 740 aaKnown RBP21.49■■□□□ 1.03
RTN1-202ENST00000342503 CCDC102AQ96A19 550 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 APBA2Q99767 749 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 MTMR12Q9C0I1 747 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 GOLPH3Q9H4A6 298 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 OSGEPQ9NPF4 335 aa21.49■■□□□ 1.03
RTN1-202ENST00000342503 ARGLU1Q9NWB6 273 aaPredicted RBP21.49■■□□□ 1.03
RTN1-202ENST00000342503 RRN3P2A6NIE6 340 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 GPR25O00155 361 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 TNPO2O14787 897 aaKnown RBP21.48■■□□□ 1.03
RTN1-202ENST00000342503 CALCAP01258 141 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 CLTAP09496 248 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 RHOXF2BP0C7M4 288 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 DNA2P51530 1060 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 NOP14P78316 857 aaKnown RBP21.48■■□□□ 1.03
RTN1-202ENST00000342503 IRX5P78411 483 aaPredicted RBP21.48■■□□□ 1.03
RTN1-202ENST00000342503 SLFN11Q7Z7L1 901 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 MSANTD4Q8NCY6 345 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 SOCS4Q8WXH5 440 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 KAT2BQ92831 832 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 RHOXF2Q9BQY4 288 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 NUB1Q9Y5A7 615 aa21.48■■□□□ 1.03
RTN1-202ENST00000342503 UMODL1Q5DID0 1318 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 F2P00734 622 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 CST3P01034 146 aaPredicted RBP21.47■■□□□ 1.03
RTN1-202ENST00000342503 SMIM10L2AP0DMW4 78 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 SMIM10L2BP0DMW5 78 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 GZMAP12544 262 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 ACO1P21399 889 aaKnown RBP21.47■■□□□ 1.03
RTN1-202ENST00000342503 C2orf54Q08AI8 447 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 DUOXA2Q1HG44 320 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 ZNF572Q7Z3I7 529 aaPredicted RBP21.47■■□□□ 1.03
RTN1-202ENST00000342503 TMEM192Q8IY95 271 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 CPB2Q96IY4 423 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 ZIC5Q96T25 663 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 PDZD7Q9H5P4 517 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 SMARCAL1Q9NZC9 954 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 EHD2Q9NZN4 543 aa21.47■■□□□ 1.03
RTN1-202ENST00000342503 ABT1Q9ULW3 272 aaKnown RBP21.47■■□□□ 1.03
RTN1-202ENST00000342503 CLSTN1O94985 981 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 KIF4AO95239 1232 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 IGHA2P01877 340 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 CTGFP29279 349 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 RPS6KA1Q15418 735 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 EFCAB13Q8IY85 973 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 PPP1R13LQ8WUF5 828 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 SCLT1Q96NL6 688 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 RPF1Q9H9Y2 349 aaKnown RBP21.46■■□□□ 1.03
RTN1-202ENST00000342503 STXBP5LQ9Y2K9 1186 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 CXCL8P10145 99 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 MCF2P10911 925 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 ARF4P18085 180 aaPredicted RBP21.46■■□□□ 1.03
RTN1-202ENST00000342503 TBXAS1P24557 533 aaPredicted RBP21.46■■□□□ 1.03
RTN1-202ENST00000342503 GPC5P78333 572 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 TFAMQ00059 246 aaKnown RBP21.46■■□□□ 1.03
RTN1-202ENST00000342503 PTPROQ16827 1216 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 CCDC181Q5TID7 509 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 DAAM2Q86T65 1068 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 SYCE1Q8N0S2 351 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 MS4A14Q96JA4 679 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 PNKPQ96T60 521 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 COG5Q9UP83 839 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 PCDHB4Q9Y5E5 795 aa21.46■■□□□ 1.03
RTN1-202ENST00000342503 B4GALT4O60513 344 aa21.45■■□□□ 1.02
RTN1-202ENST00000342503 ASS1P00966 412 aaKnown RBP21.45■■□□□ 1.02
RTN1-202ENST00000342503 PAFAH1B1P43034 410 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms