RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 XPNPEP1Q9NQW7 623 aa16.13■□□□□ 0.17
TPM3-208ENST00000341485 TOPORSQ9NS56 1045 aaPredicted RBP16.13■□□□□ 0.17
TPM3-208ENST00000341485 CTTNBP2NLQ9P2B4 639 aa16.13■□□□□ 0.17
TPM3-208ENST00000341485 PLAAQ9Y263 795 aa16.13■□□□□ 0.17
TPM3-208ENST00000341485 ALG6Q9Y672 507 aa16.13■□□□□ 0.17
TPM3-208ENST00000341485 ZNF236Q9UL36 1845 aa16.13■□□□□ 0.17
TPM3-208ENST00000341485 ADGRA3Q8IWK6 1321 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 TULP1O00294 542 aaPredicted RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 CYP26A1O43174 497 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 DAPK3O43293 454 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 LGR5O75473 907 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 SKOR1P84550 965 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 DNAJC21Q5F1R6 531 aaKnown RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 KCTD16Q68DU8 428 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 KRT39Q6A163 491 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 MAATS1Q7Z4T9 603 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 HELQQ8TDG4 1101 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 NTPCRQ9BSD7 190 aaKnown RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 TMEM8AQ9HCN3 771 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 PDLIM7Q9NR12 457 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 COQ4Q9Y3A0 265 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 GRIN2DO15399 1336 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 RBM47A0AV96 593 aaKnown RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 PPFIA4O75335 1185 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 HSD17B3P37058 310 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 RFC5P40937 340 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 MFAP3P55082 362 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 MAP2K5Q13163 448 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 UAP1Q16222 522 aaPredicted RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 MORN1Q5T089 497 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 PLPPR4Q7Z2D5 763 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 TRIM50Q86XT4 487 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 BBXQ8WY36 941 aaPredicted RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 MFSD14AQ96MC6 490 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 FBXL18Q96ME1 805 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 ABHD16BQ9H3Z7 469 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 SMARCAD1Q9H4L7 1026 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 ERVK-5Q9HDB9 667 aa16.12■□□□□ 0.17
TPM3-208ENST00000341485 CHORDC1Q9UHD1 332 aaPredicted RBP16.12■□□□□ 0.17
TPM3-208ENST00000341485 TMEM110-MUSTN1A8MSY1 372 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 TULP2O00295 520 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 MMEP08473 750 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 FLT3P36888 993 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 GPC3P51654 580 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 RTP1P59025 263 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 PTENP60484 403 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 FMO1Q01740 532 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 ARHGAP1Q07960 439 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 CRHR2Q13324 411 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
TPM3-208ENST00000341485 ADAT2Q7Z6V5 191 aaKnown RBP16.11■□□□□ 0.17
TPM3-208ENST00000341485 TMC2Q8TDI7 906 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 TAS1R2Q8TE23 839 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 KRT35Q92764 455 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 HHIPL1Q96JK4 782 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 TRIM51Q9BSJ1 452 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 KATNBL1Q9H079 304 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 LCMT1Q9UIC8 334 aa16.11■□□□□ 0.17
TPM3-208ENST00000341485 ATMINO43313 823 aaPredicted RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 GZMAP12544 262 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 GNGT1P63211 74 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 ACVR2BQ13705 512 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 AADACL2Q6P093 401 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 LRIG3Q6UXM1 1119 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 POMGNT1Q8WZA1 660 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 TMEM143Q96AN5 459 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 LRRC45Q96CN5 670 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 KCNG1Q9UIX4 513 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 H0YCG3 227 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 H0YGN5 161 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 MTA2O94776 668 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 TM4SF4P48230 202 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 MARCKSL1P49006 195 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 SLC26A2P50443 739 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 TTC19Q6DKK2 380 aaPredicted RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 CYP4F22Q6NT55 531 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 TAS1R3Q7RTX0 852 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 C1orf131Q8NDD1 294 aaKnown RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 ATP8B4Q8TF62 1192 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 NT5C1BQ96P26 610 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 NAP1L3Q99457 506 aaPredicted RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 DPH5Q9H2P9 285 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 UTP11Q9Y3A2 253 aaKnown RBP16.1■□□□□ 0.17
TPM3-208ENST00000341485 NFS1Q9Y697 457 aa16.1■□□□□ 0.17
TPM3-208ENST00000341485 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 MIF4GDA9UHW6 222 aaKnown RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 EIF3HO15372 352 aaKnown RBP eCLIP16.09■□□□□ 0.17
TPM3-208ENST00000341485 TOMM70O94826 608 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 CYP11B1P15538 503 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 MESDQ14696 234 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 PLCB4Q15147 1175 aa16.09■□□□□ 0.17
TPM3-208ENST00000341485 TARBP2Q15633 366 aaKnown RBP16.09■□□□□ 0.17
TPM3-208ENST00000341485 CEP85LQ5SZL2 805 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms